KEGG   Campylobacter iguaniorum: CIG1485E_1706
Entry
CIG1485E_1706     CDS       T03252                                 
Name
(GenBank) mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily)
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
caj  Campylobacter iguaniorum
Pathway
caj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:caj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CIG1485E_1706
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caj03019]
    CIG1485E_1706
Messenger RNA biogenesis [BR:caj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CIG1485E_1706
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Lactamase_B_6 MupG_C DUF2235
Other DBs
NCBI-ProteinID: AII15515
UniProt: A0A076FB90
Position
complement(1670709..1672694)
AA seq 661 aa
MNEENKEKSVAEKSVTSEKPNKRRRYKNHRDNLKKQVKTGEEEATQNAQTNQNGENKEAP
KPKKRRHKTNNPTVKISGNEDWQKDMKAAIEANKASHELRLNPLKYLSSSEHKIRVTPLG
GLGEIGANMTVFETENDAIIVDIGMSFPSESMHGVDILIPDFDYVRKIKQKIRGIIITHA
HEDHIGAVPYFFKEFQFPLYATPLPLGMISNKFEEHGLKSYRSYFRPIEKRKIYELGDFE
IELIHITHSIIDASALAITTKAGTILHTGDFKIDHTPIDGYPTDLNRLAYYGEKGVLCMM
SDSTNSYKEGITKSESSVGKTFDSIFATAKGRVIMSTFSSNIHRVYQAIERGIKHGRKVC
VIGRSMERNLWTAIELGYVGLDKKIFIDANEVGKYPDNEVLIVTTGSQGETMSALYRMAT
DEHKYIKIKPTDQIIISSKAIPGNETSVSTVLNFLLKSGASVAHQDFSEIHVSGHAAQEE
QKLMIRLIKPKFFLPVHGEYNHIVRHKETALACGVDERNVYLMSDGDQIEICQKYIKRVK
TVKTGKVFIDNQINKQISDDVVIDRQKLAEAGVVTIIAQIDKNAKKLIQNRVISHGLVSE
RQSKNLSKEMEEVLLQFLSNVKDELLHDPRALENQIRQVIRKHIFRKIKKYPTIVPVVYL
M
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgaacgaagagaacaaagaaaaatcagttgcggaaaaatcagttacgagtgaaaaacca
aataaaagacgcagatacaaaaatcatagagataatctaaaaaaacaggtcaaaacaggc
gaagaagaggcaactcaaaacgcccaaactaatcaaaatggcgaaaacaaagaagctcca
aaacctaaaaaacgcagacacaaaacgaacaatccaacagtaaaaatcagtggtaatgaa
gactggcaaaaggatatgaaagccgcaatagaggcaaacaaagcaagccacgagctaaga
ctaaatccactaaaatacctaagttcaagcgagcataaaatcagagtaactccacttggt
gggcttggcgaaatcggtgcgaatatgaccgtatttgagaccgaaaacgacgctattata
gtagatatcggtatgagttttccaagcgagagcatgcacggggttgatattttgatacca
gattttgattatgttcgcaaaatcaaacaaaaaatccgtggtatcatcatcactcacgct
cacgaagaccacatcggagctgtgccgtattttttcaaagaatttcaattcccgctttat
gctactccacttccactaggaatgataagtaacaaatttgaagaacatggcttaaaatca
tatcgcagctacttccgcccgatagaaaaacgcaaaatttacgagcttggcgactttgaa
atcgagcttatacatataactcactctatcattgatgcaagtgctttagctatcactaca
aaagctggaacgatacttcacacaggcgatttcaagatagatcacactccaatcgatggc
tatccgacagatctaaaccgccttgcgtattatggcgaaaagggcgttttgtgtatgatg
agcgactctacaaatagctataaagagggtatcacaaagagtgaaagcagcgtaggaaag
acatttgatagcatatttgccactgcaaaaggtagggttatcatgagcacatttagctca
aatatccaccgtgtttatcaagctatcgagcgtggtatcaaacatggcagaaaagtctgt
gtaataggcagaagcatggagagaaacctctggactgctatcgagcttggatatgtaggc
ttagacaaaaagatatttatcgacgcaaatgaagtcggaaaatacccagacaatgaggtc
ttaatcgtgactactggaagtcaaggcgagactatgagtgcgctttaccgcatggcgact
gatgagcataaatatatcaaaattaaaccaacagatcagatcataatcagctcaaaagca
atcccaggcaatgaaacaagcgtttctactgttttaaattttttactaaaaagtggagca
agcgtagctcatcaagacttcagcgaaatccacgtcagtggtcacgcagcacaagaagag
caaaagcttatgatacgccttatcaagcctaaatttttcttgccagttcatggagagtat
aaccacatcgttcgccacaaagaaacagctttggcgtgcggggttgatgagagaaatgta
tatcttatgagtgatggtgatcagatagaaatctgccaaaaatatattaaaagagtaaaa
acagtaaaaactggtaaggtatttatagataatcaaatcaacaaacaaatcagcgacgat
gtcgtcatagatcgccaaaaactagctgaagctggagtggtaactatcatcgctcaaata
gataaaaatgctaaaaaacttatccaaaaccgcgtcataagccatggtcttgtgagcgaa
aggcagagcaaaaatctaagcaaagagatggaagaggtgcttttacagtttttaagtaac
gtaaaagatgagcttttacacgatccaagagccttagaaaaccaaatcagacaagttatc
agaaagcatatatttagaaaaatcaaaaaatacccaacaatcgtccctgttgtgtactta
atgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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