KEGG   Cicer arietinum (chickpea): 101505823
Entry
101505823         CDS       T02819                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
cam  Cicer arietinum (chickpea)
Pathway
cam03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    101505823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cam03400]
    101505823
DNA repair and recombination proteins [BR:cam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     101505823
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II GCP5-Mod21_N
Other DBs
NCBI-GeneID: 101505823
NCBI-ProteinID: XP_004508573
UniProt: A0A1S2YR17
Position
Ca7:complement(7491019..7501495)
AA seq 942 aa
MDENFDALNHKLPELKLDSKQAQGFLSFFKTLSDDPRAIRFFDRRDYYTAHGENATFIAK
TYYHTTTALRQLGSGSNALSSVSVSRNMFETIARDLLLERTDHTLEVYEGSGSNWRLVKS
GTPGNIGNFEDVLFANSEMQDSPVVVALSLNFCENGCTIGLGFLDLTKRLLGMAEFLDDS
HFTNVESALVALGCKECLVPIERAKSIEYRMLCDVLTKCGVMLTERKKSEFKTRDLVQDL
GRLVKGSIEAVQDLVSGFEFAPGALGALLSYAELLADESNYENYSLRRYNLDSYMRLDSA
AMRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVEEINSRLDVVQA
FVEDTVLRQDLRQHLKRISDIERLVHNLQKRRAGLQHVVKLYQSSIRLPYIKSAIDRYDG
QFSSMMKSRYLKDLELWTGVDRLHKFIELVETSVDLDHLENGEYMISSSYDSKLTELKEQ
QESLESQIHNLHRQTADDLDLPMDKALKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIVL
ETRKDGVKFTNTKLKKLGDRYQQIIEEYKSCQKELVNKVVEIAATFSEVFESLAELISEL
DVLLSFADLASSCPTPYTRPDITSSDKGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS
WFQIITGPNMGGKSTFIRQVGVNILMAQIGSFVPCDKASISVRDCIFARVGAGDCQLRGV
STFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFAT
HFHELTALALENGSNDPHKQIVGVANYHVSAHIDASTRKLTMLYKVEPGACDQSFGIHVA
EFANFPESVVALAREKAAELEDFSPSAISLIDSTEEEGSKRKREFEPDDVSQGAAKARQI
LEAFVALPLETMDKKQALQEVKKLKDNLEKDAQNCHWLQKFL
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggatgaaaacttcgacgccctcaatcataaactccccgagctcaaattagactctaag
caagcacaagggtttctgtcatttttcaaaaccctatcggatgacccgagggccattagg
ttttttgatcgtcgggattactatactgcccatggtgagaatgcaacattcattgccaaa
acctactatcacactactactgctttgagacagttgggtagtggatcaaatgctctttcc
agtgtaagtgtcagtaggaacatgtttgaaacaattgcccgtgatctacttttagagaga
acagaccatacacttgaggtctatgagggcagcggctctaactggagattggtcaaaagt
ggtacacctggtaacatcggcaattttgaagatgttttatttgctaacagtgaaatgcaa
gattctccagttgttgttgccctgtcacttaacttctgtgaaaatgggtgcaccattgga
ttaggatttcttgatctaactaagagactacttgggatggctgaattccttgatgacagt
catttcacaaatgtggagtcagcattggttgctcttggttgcaaagaatgccttgtgcct
attgagcgtgcaaaatctattgaatatagaatgttgtgtgacgtgttgactaaatgtggt
gtgatgctaactgagagaaagaaatctgagtttaagactagagatctggtacaagatctt
ggcaggcttgtcaaaggttctattgaagcagttcaagatttagtgtctggatttgaattt
gcacccggtgctctgggggcactgctatcttatgcagagttactggcagacgaaagcaat
tatgaaaattatagtctgcgtaggtacaatcttgacagttacatgaggttggattctgca
gccatgagggcacttaatgtcatggaaagcaaaactgatgcaaacaaaaacttcagtttg
tttggtctcatgaataggacctgtacagctggaatgggaaagcggttattgcacatgtgg
ctaaaacagccattattagatgtagaagaaattaactccaggttggatgtagtacaggca
tttgtagaggacactgtgcttcgccaagatctgaggcagcatctaaaaagaatatcagac
attgagcgtttggtgcacaatcttcagaagcgaagagctggtctgcaacatgttgtcaaa
ctttatcagtcaagtatacgactgccttacattaaaagtgctatagacaggtatgatgga
caattttcctcaatgatgaagtccaggtatttgaaggatttggagttatggaccggtgtc
gatcgccttcataaatttattgagcttgtagaaacttctgttgaccttgatcatctggag
aatggggaatacatgatttcctcaagttatgactctaaactaactgaactgaaggagcag
caagaatcactagagagccaaatacataacttgcacagacaaactgctgatgatcttgat
ctgcctatggataaggcattaaagttggataagggcacacaatttggacatgttttcaga
atcacaaagaaggaagagccgaaaataaggaagaagctcaacacccagtttattgtactg
gaaacccgtaaagatggagtgaagtttaccaacacaaaactcaaaaaactgggggacaga
taccaacaaattattgaggagtacaagagctgtcaaaaagagttggttaataaagtagtt
gaaattgcagcaactttctccgaggtgttcgaatctttagctgaattaatttccgaattg
gatgtgttacttagttttgctgatttggcttctagttgtcctactccgtatacaaggcct
gacatcacctcatcggacaaaggagatattattttagaaggtagcagacacccttgtgtt
gaggcacaagactgggtgaattttataccaaatgattgtaagcttatcagaggaaaaagt
tggtttcaaataataacagggcctaacatgggcgggaaatcaacattcatccggcaggtg
ggcgtgaatattttgatggcacaaattggttcgtttgttccatgcgacaaagccagcata
tctgttcgtgattgcatttttgctcgtgttggtgcaggtgactgccaacttcgtggagtt
tctacctttatgcaagaaatgcttgaaactgcgtcaatattaaaaggagctactgacaag
tccttgataatcattgatgagttgggacgtgggacatcaacttacgatggatttggccta
gcttgggcaatttgtgagcacattgttgaagtgatcaaagcacctactttatttgcaacc
cactttcatgagctgactgcattagcccttgaaaatggtagcaatgatccacataagcaa
attgttggtgtggcaaattatcatgttagtgcacatattgatgcatcaacccgcaagcta
actatgctatacaaggttgaaccaggagcttgtgatcagagttttggtattcatgtcgct
gagtttgcaaacttccctgaaagtgttgtcgccctagctagagaaaaggcagcagagttg
gaagatttttctccctctgcgatatccttaattgactctacggaagaggaaggttctaaa
cgtaagagagaatttgaacctgatgatgtgtctcaaggggctgcaaaggctcgccaaatt
cttgaagcgtttgttgctttgccactagaaaccatggacaaaaagcaagctttgcaagaa
gttaagaagttgaaagataatttagagaaggatgcacaaaactgtcattggttgcagaaa
ttcttgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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