KEGG   Citrobacter amalonaticus Y19: F384_15925
Entry
F384_15925        CDS       T03934                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
cama  Citrobacter amalonaticus Y19
Pathway
cama00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cama00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    F384_15925 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cama01007]
    F384_15925 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cama03016]
    F384_15925 (lysS)
Enzymes [BR:cama01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     F384_15925 (lysS)
Amino acid related enzymes [BR:cama01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   F384_15925 (lysS)
Transfer RNA biogenesis [BR:cama03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    F384_15925 (lysS)
 Prokaryotic type
   Other AARSs
    F384_15925 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: AKE59940
UniProt: A0A0F6RG35
Position
complement(3469256..3470773)
AA seq 505 aa
MSEQHAQGADAVADLNNELKTRREKLAGLREQGIAFPNDFRRDHTSDQLHADFDAKENEE
LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGTYNEQFKKWDLGD
ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES
RNTFKVRSQILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQDVLGKTEVPYGDEVFDFGKPFEKLTMREAIKKYRPETEMAELDNFDSAKAIAESLGI
KVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFQDQVNAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtctgaacaacacgcacagggcgctgacgcggtagccgatcttaacaacgaactgaaa
acgcgccgtgagaagctggctggactgcgcgagcagggtatcgccttcccgaacgatttc
cgtcgcgatcacacctcagaccaactgcacgctgactttgatgcgaaagagaacgaagag
ctggaagcgctgaacattgaagtgtccgttgcaggccgcatgatgacccgtcgtatcatg
ggtaaagcgtcttttgttacgttgcaggacgtgggtggtcgtattcagttgtacgttgcc
cgtgacgatctgccggaaggcacttacaacgagcagttcaagaaatgggacctcggcgac
atcctcggcgcgaaagggaaactgttcaaaaccaaaacgggcgaactgtctatccactgc
accgaattgcgtctgctgaccaaagcgctgcgtccgctgccggataaatttcacggtttg
caggatcaggaagcgcgttaccgtcagcgctatctggatctcatctctaacgatgaatcc
cgtaacacctttaaggtgcgttctcagatcctggcgggcatccgtcagttcatggttggt
cgcggctttatggaagttgagaccccgatgatgcaggtgatcccaggcggcgcgtctgcg
cgtccgtttatcacccatcataatgcgctggatctggatatgtacctgcgtattgcaccg
gaactgtacctgaagcgtctggtggtcggtggcttcgagcgcgtgttcgaaatcaaccgt
aacttccgtaacgaagggatctccgttcgtcataacccagagttcaccatgatggaactc
tacatggcgtatgcggactataaagatctgatcgaactgaccgagtctctgttccgtacc
ctggcgcaagatgtgttaggtaaaacggaagtgccttatggtgatgaagtgttcgacttc
ggcaagccgttcgaaaaactgaccatgcgcgaagctatcaagaaataccgtccggaaacg
gaaatggctgaactggataactttgactccgccaaagcgattgctgaatctctcggtatc
aaggtagagaagagctggggtctgggccgtatcgtgactgaaatcttcgaagaagtggcc
gaagcgcatctgattcagccgaccttcattaccgaatacccggcagaagtctctccgctg
gcgcgtcgtaatgatgagaatccggaaatcaccgatcgctttgagttcttcatcggcggt
cgtgagatcggtaacggctttagcgagctgaacgatgcagaagatcaggcgcagcgcttc
caggatcaggtgaacgcgaaagaagccggtgacgacgaagcgatgttctacgacgaagac
tatgtgactgcactggagcacggtctgccgccgacggcgggtctgggcattggtatcgac
cgtatggtgatgctgttcaccaacagccacaccatccgtgatgtgatcctgttcccggcg
atgcgcccggtaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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