KEGG   Campylobacter fetus subsp. testudinum 03-427: CFT03427_1234
Entry
CFT03427_1234     CDS       T02899                                 
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
camp  Campylobacter fetus subsp. testudinum 03-427
Pathway
camp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:camp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CFT03427_1234 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:camp03019]
    CFT03427_1234 (pnp)
   03016 Transfer RNA biogenesis [BR:camp03016]
    CFT03427_1234 (pnp)
Enzymes [BR:camp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     CFT03427_1234 (pnp)
Messenger RNA biogenesis [BR:camp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CFT03427_1234 (pnp)
Transfer RNA biogenesis [BR:camp03016]
 Prokaryotic type
  tRNA degradation factors
   CFT03427_1234 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase KH_1 S1 S1_2
Other DBs
NCBI-ProteinID: AGZ82090
Position
complement(1253461..1255647)
AA seq 728 aa
MQCSIEVNNQIEIFDLDKVAKQAAGAVLMRVKNTVVLAAVAREDTQVEEDFLPLTVQYIE
KQYAAGRIPGGYVKRETKPGDFETLTSRIIDRSLRPLFPKGYAYPTQIVVMVLSSDPEVD
LQVVSLNAASVALYLSDIPVNSPVCGVRVGHINGKFVINPSNSELKNSALDLYVAGVKDE
LLMIEMRSLPNEQNEIVPVIAIDPMIDPSLNEGFVSRQKMNEFSEDLMIDGIKLATQAIL
KGSNAYEEAFCNYKKEIANLEYKPEIENENVAIYIDEFYKDDVKAAIHQMAKSERASELS
KIAKQIALSEVAQKEGWDEALISNILGKYKKKLVRTGIIKDKKRADGRGLKDVRPISIET
NILPNAHGSCLFTRGQTQALVVTTLGTDNDAQMSEYLTEKNAVADKFMFNYNFPGFSVGE
ASPLKAPGRRELGHGNLAKRALYPSIDLNSPYSLRVVSEILESNGSSSMASVCGGSLSLR
AAGVETIKLVAGVAMGLIFEGDEHAVLTDIMGLEDHDGDMDFKVAGSKDGITALQMDIKL
GGISLDVLKEALYQAKEAREHILNLMVKADEEIIINEDVLPKLELFSVDPSKIVDIIGQA
GKTIKEIIERFEVSIDLDRDKGEVKIAGGERQKVEAAKDYIIQITQKDSRGGGFRNKREH
KNVTPFNIGDEFEGEIKKMAPFGAFISLRDGVDGLLHISKIVSPLKEGDMIKVKVSDIKG
GKISLDLN
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgcagtgttcaatagaagtaaataatcaaattgaaatttttgatcttgataaggttgcc
aaacaagcagccggcgcagtattaatgcgcgtgaaaaatacagtcgtattagccgcagtt
gctagagaagatactcaagtagaagaggattttttacctcttactgtacagtatatagaa
aaacagtatgccgcaggtaggataccaggaggatatgttaaaagagagactaaaccaggg
gattttgagaccttaacaagccgcattatagatagaagcttaagacctttatttcctaaa
ggatatgcatatccaactcagattgtcgtaatggttttaagtagtgatccagaagtggat
ttgcaagtagtatcgctaaatgctgcgagtgtagctttatatcttagtgatatcccagtt
aatagtccagtttgtggcgttagagtagggcatataaatggtaaatttgttataaatcca
agcaactcagagctaaaaaactctgctcttgatctttacgtagcaggtgtaaaagatgaa
cttcttatgatagaaatgagaagtttgcctaatgagcaaaatgaaattgtaccagttatc
gctatagatcctatgatagatcctagtttaaatgaaggttttgtctcaagacaaaaaatg
aatgaatttagcgaagatcttatgatagatggtataaaattagctacacaagccatacta
aaaggaagcaacgcatatgaagaggcgttttgtaactacaaaaaagagattgcaaattta
gagtataaaccagagatagaaaatgaaaatgttgcgatatatatagatgaattttacaaa
gatgatgtaaaagcggctattcatcaaatggccaaaagcgaaagagctagtgagctttct
aaaatagctaagcaaatagctcttagcgaagttgctcaaaaagagggctgggacgaagct
cttatctcaaatatacttggaaaatataagaaaaagttagttagaacagggatcataaaa
gataaaaaaagagctgatggaagaggtttaaaagatgttagaccgatcagcattgagaca
aatattttaccaaatgcgcacggaagttgtctatttactcgtggtcaaactcaagctctt
gttgtaactactttaggcactgataacgatgctcaaatgagtgaatatttaacagaaaaa
aatgcggttgccgataaatttatgtttaattataatttccctggatttagcgtaggcgag
gcaagtcctttaaaagctcctggacgacgtgagttaggacatggaaatttagcaaaaaga
gctctttatccaagtatagacttaaatagtccatactctttaagagttgttagcgaaatt
ttagaaagtaatggttcaagctctatggctagcgtatgtggaggttctttatcgcttaga
gcagcaggagtagaaactatcaagcttgtagctggagtggcgatgggtcttatatttgaa
ggtgatgaacacgctgttttaacagatattatgggtcttgaagatcacgatggagatatg
gatttcaaagttgcaggttcaaaagatggtatcaccgctcttcagatggatatcaaatta
ggcggaattagtttagacgtattaaaagaagcgttatatcaagcaaaagaagctagggag
catattttaaatttaatggttaaagcagatgaagagataatcataaatgaagatgtttta
ccaaaattagaattatttagcgtagatcctagtaaaatagttgatataatagggcaagct
ggaaaaactataaaagagattatagaaagatttgaagttagcatagatcttgatagagat
aaaggtgaagtaaagatagctggaggagagagacaaaaggtagaagccgctaaagattat
attatacaaattacgcaaaaagacagcagaggcggcggttttaggaacaaaagagagcat
aaaaacgtaactccttttaatataggagatgagtttgagggtgaaatcaaaaaaatggct
ccttttggtgcatttatatctttaagagatggtgttgatggacttttacatatatcaaaa
atagtttcacctttaaaagagggtgatatgataaaggtaaaagtttcagatatcaaaggt
ggaaaaatatcgttagatcttaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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