KEGG   Cyclobacterium amurskyense: CA2015_2931
Entry
CA2015_2931       CDS       T03993                                 
Name
(GenBank) Superfamily I DNA and RNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
camu  Cyclobacterium amurskyense
Pathway
camu03420  Nucleotide excision repair
camu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:camu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CA2015_2931
   03430 Mismatch repair
    CA2015_2931
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:camu03400]
    CA2015_2931
Enzymes [BR:camu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CA2015_2931
DNA repair and recombination proteins [BR:camu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CA2015_2931
   MMR (mismatch excision repair)
    Other MMR factors
     CA2015_2931
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30 DEAD HrcA ResIII
Other DBs
NCBI-ProteinID: AKP52337
UniProt: A0A0H4PVC6
Position
complement(3534475..3537231)
AA seq 918 aa
MQYTKYQEEAINTIDQNLQIIACAGSGKTQVISQRIVNILKSKDDVNPSNIIAFTYTEKA
AAELKTRVLKLCREQLGDIQGLAEMYIGTIHSWCLQAIQDNIYEYQKFSVLDEIKLKLFI
DKHYQQIGMADVGMDRYTDTGRFIAIMSILREAEITDGKELDQEWIDAQGKYEQTLKSSA
YFDFTMIMTEAILNLRNNPDFKNKIQEKLKYLIVDEYQDVNPIQEELIFNLASLGANICV
VGDDDQTIYQWRGGDVRYIQTFSDRYPNVHYIKLEDNFRSTKGVIDAALKCILNNTDRLP
KIMNASGHQKYDLNDIIYNQFDELDQENQFIVDTIRKVRSESEGIAFQDKKDSKLRGIDY
SDMVILIRTWRKAESIMHALQDNNIPFVVSGVNELFQRPEIKAARALYEFLSDELEEDSL
KLYWESVSDNIDEESLDFAIAELAKKKPKPKTYYATFSIQGIFWDFIENAKLTEETFFDP
GHDGVIGNEINEVIFYNLGMFSQMINDFESIHFTDKPSYRLRGFLNFLRYSADGYYPEGW
LNNSYKTPNAVQIMTIFQSKGLEFPVVFIPGMNKNYLPVKKPGGKQIWHFIDKELIKDQY
RYETNVEDERRLMYVAITRSQKYLFVSRSKENRLYQKESVFCKEISNSDYLISTTSFDYS
DKLKATPESKKETNSILLNFSVLKAYFDCPYRFKLISLYGFNQPISAQVGYGQSLHNILM
EMHRRHLDGETIDESQIAQYVDRHLHLPYAHDQIFEDVRESSIQVSYDYLAENREDFDSI
EYAEKEIQIDLGDGIMVNGRMDLIKKKDLDGNFITTIVDFKSKDDVQAREITMEQLSMYA
LGYKELTGETANYLQIFSLDEEQHRKHTQPLANDKIAEIKTKIVSSANDIRDNKLDKTHD
PKACASCYQRKLCSGAKV
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgcaatacactaaatatcaagaggaagcgataaacacaatcgatcagaatcttcagatc
attgcttgtgctggatcaggcaaaacgcaggttatatctcagaggatagttaacattttg
aaatcaaaggatgatgttaacccttcgaacataatagcattcacttacactgaaaaagct
gctgcggaactaaaaactagagtcctcaaattgtgtcgtgagcaattaggagacatacaa
ggtcttgctgaaatgtatattggtacgatacattcctggtgcctgcaagctattcaggat
aatatctatgaataccaaaagttctcagttcttgatgagatcaagttgaagttgtttatt
gacaagcactatcagcaaattgggatggcggatgttggtatggatagatacactgataca
ggccgtttcatagccatcatgagtattcttagagaggctgaaattacggatggaaaggaa
ctcgatcaggaatggatcgatgctcaggggaagtatgagcaaacattaaagtcaagtgca
tacttcgatttcactatgattatgactgaggcaatcttaaacctcagaaacaatcccgat
ttcaaaaataagattcaggaaaaactcaaatatctaattgtagacgaatatcaggatgtt
aacccaatacaggaagaacttatttttaatctggcaagcttgggagctaatatttgtgta
gttggtgatgatgaccaaacaatataccaatggcgtggtggagatgttagatacattcaa
acgttcagtgataggtatcccaacgttcactacatcaagttggaagataatttcagaagt
actaaaggtgtaattgatgccgcattaaaatgcatcctcaataatacagacaggcttcca
aaaataatgaatgcctcaggtcaccagaaatatgacttgaatgacattatatacaatcag
tttgatgaactagatcaagagaaccaattcatagtagatactatacgaaaagttcgtagt
gaaagtgaaggcattgcctttcaggataaaaaagactccaagctaagggggattgattat
tctgacatggttatacttatccgcacctggcgtaaggctgagtcaataatgcatgcttta
caagacaacaatataccattcgtagttagtggagttaatgagctttttcaaagacctgag
ataaaggctgcaagagctttatatgaatttctaagtgacgaacttgaagaagactcctta
aagctttattgggaatcagtatcggacaatattgatgaagaaagccttgattttgccatt
gctgaattagccaagaaaaaacctaaaccgaaaacctattatgccaccttctctattcag
gggatattttgggatttcatagagaatgcaaaactaacggaagaaacattttttgaccct
ggtcatgacggtgtaattggcaatgagattaacgaggtgattttctacaatcttgggatg
ttcagccaaatgattaatgattttgaatctattcactttaccgataaaccctcatatcgc
cttagaggatttctaaactttctgaggtattcagcagacggttactatccagaaggctgg
ctaaataactcatacaaaacaccaaatgccgtacaaataatgacaatattccaatctaaa
ggattggagtttccagtagtctttattcctggcatgaacaaaaactacctccctgttaaa
aagccaggaggcaaacagatctggcatttcattgataaggaattgattaaagatcaatat
aggtatgaaaccaatgttgaggacgaaagacgacttatgtatgtggcaattacacgttct
caaaagtatctctttgtatctaggtcgaaagaaaaccgattatatcaaaaagagtccgtc
ttctgtaaagagatcagtaattcagactacctaatatctacaacctcgtttgactattct
gacaagctaaaagctacaccagaatccaagaaagaaaccaactcaatacttctaaatttc
tctgtactcaaagcttattttgattgcccttatagattcaaattgatttctttatatggc
ttcaatcagcctatttccgcacaagtaggttacggtcagtcgttgcataacattctaatg
gagatgcaccggagacacttagatggggaaactattgatgaatcacaaattgcacaatac
gttgatagacaccttcacctaccttatgcacatgatcaaatctttgaagatgttagagaa
agctccattcaggttagctatgattatttagcggagaacagagaagattttgacagtata
gaatacgctgaaaaggaaattcaaattgacctgggtgacggaataatggtcaacggcaga
atggatttgataaagaagaaagacctggacggcaacttcattaccaccattgtagatttt
aagagcaaagatgatgtacaagctagagaaataaccatggagcagctatccatgtatgca
cttggctacaaagaattaacgggtgaaactgctaattacttacaaatcttctcgcttgat
gaagagcaacatagaaaacatacacaacctttagcgaacgacaagattgcagaaattaaa
actaaaatcgtgagttcagccaatgatataagagataataaattggacaaaacccatgat
cctaaagcctgtgcatcttgctatcaacggaagctatgttcgggtgcaaaagtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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