KEGG   Capsicum annuum (peppers): 107843834
Entry
107843834         CDS       T04646                                 
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107843834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cann03019]
    107843834
Messenger RNA biogenesis [BR:cann03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     107843834
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 107843834
NCBI-ProteinID: XP_016543721
UniProt: A0A1U8EBD2
Position
10:complement(217734717..217741934)
AA seq 303 aa
MTAANGLSDLSSEMEVAAFRRLFPLRYHEQHLLKSVRPDARKLGSARDTTVALGAVASAD
GSALAKIGATTMLAAIKMEVMTPTMESPDEGSLAIEFHMPPICSPLVRPGRPADVASVIS
KQLSDTILSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLNIP
VVSLNDDGRIVLVSEDTVQLKLEKEPVNTEKRKLKLNSPPFSLTCILHKNYILADPTAEE
ESIMETVVTVVLDSSYQLVSLYKPGGPVLGHTSIIQDCVALARQRVKELQNVLNEAISDM
EID
NT seq 912 nt   +upstreamnt  +downstreamnt
atgactgctgccaatggcttgagtgacttgtcttcagagatggaggtggctgcatttaga
cgtcttttccctttgcgctatcatgagcaacatcttcttaaatctgtccgacctgatgcc
cgaaagcttggaagtgctagagatacaacagtagcacttggtgctgttgcctctgctgat
ggatcagcactggccaagattggcgccactacaatgctggctgccatcaaaatggaagta
atgacaccaacaatggaatctccagatgagggatctctagctatcgaattccacatgcct
cccatttgttctcccctggttcgacctggtaggcctgcggatgtagcatcagtaatttca
aagcagctgtcagacactatcttgagttctggcatgattgacttaaaagaattgtgcttg
gttggaggaaaagctgcatggatggcctacctggacatatactgtttggatgcggatggt
gccctgtttgacgctgcattactgtctgcagttgctgccttttcgcatttgaacattcca
gtagtgtctttgaatgatgatgggcgaatagttctcgtttctgaggacactgtccaattg
aaattagagaaggagcccgtgaatacagagaaaagaaagctcaaattgaactctccgcca
ttctcgttaacatgcatacttcacaagaactacatcctcgcagatcctacagcagaggaa
gaatcaataatggaaacggttgtaactgtggtattggactcgtcttaccagcttgtttcg
ctttataaaccaggtggaccagttcttggccatacatcaattatccaggattgcgtcgcg
ctagcaagacagagagtgaaagagcttcagaatgtcttgaacgaagcaatttctgatatg
gagatagactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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