KEGG   Cellulophaga algicola: Celal_2378
Entry
Celal_2378        CDS       T01404                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
cao  Cellulophaga algicola
Pathway
cao03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Celal_2378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cao03021]
    Celal_2378
   03400 DNA repair and recombination proteins [BR:cao03400]
    Celal_2378
Enzymes [BR:cao01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Celal_2378
Transcription machinery [BR:cao03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Celal_2378
DNA repair and recombination proteins [BR:cao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Celal_2378
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Apocytochr_F_C
Other DBs
NCBI-ProteinID: ADV49669
UniProt: E6X7I7
Position
2699487..2703785
AA seq 1432 aa
MARQRDNNTIKRFDKISIGLASPESILAESRGEVLKPETINYRTHKPERDGLFCERIFGP
VKDYECACGKYKRIRYRGIVCDRCGVEVTEKKVRRDRVGHINLVVPVAHIWYFRSLPNKI
GYLLGLPSKKLDMIIYYERYVVIQPGIAKGPEGEEINKMDFLTEEEYLNILESVPVENQY
LEDSDPNKFIAKMGAECLIDILARIDLDVLSYELRHKANTETSKQRKTEALKRLQVVESL
RESQENRENRPEWMIMKVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLV
EIKAPEVILRNEKRMLQESVDSLFDNTRKASAVKTESNRPLKSLSDSLKGKQGRFRQNLL
GKRVDYSARSVIVVGPELRLFECGIPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIIDK
KEPVVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIRLHPLVCTAFNADFDG
DQMAVHLPLGPEAILECQLLMLASHNILNPANGSPITVPSQDMVLGLYYMTKERKSTPEV
PVKGEGLIFYSAEEVVIAHNEGMVDLNAGVKVRAKNFNEAGELVYQIIPTTVGRVLFNRM
VPEKAGYINEVLNKKSLRDIIGGILEATDVPTTADFLDKIKTMGYEFAFKGGLSFSLGDI
IIPPEKHEMIADANGQVEGIMANYNMGLITNNERYNQVIDVWTSTNSQLTELAMKRIRED
QQGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSTAGGGEIIENPILSNFKEGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIINTEDCGTLRGIEVEALKKNE
EIVETLGERILGRVSLHDVYNPLTEELILKAGQEILEVDVRLVEASPVDKIEVRSALTCE
AEKGICGKCYGRNLSTNKMVQRGEAVGVVAAQSIGEPGTQLTLRTFHVGGIAGNISEDNK
LSAKFGGVAEIEDLRTVTSTDNEGNPSEIVISRTSEIKVVDAKSGIVLSTNNIPYGSQLF
VKNGSKVAKDEVICQWDPYNGVIVSEFPGKIAYENVDQGVTYQVEIDEQTGFQEKVISES
RNKKLIPTLLIMNSKDEVLRSYNLPVGSHIMVDNGEKIKEGKILVKIPRKSAKSGDITGG
LPRVTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIIESKLGEVKKYLVKLSNQILV
QENDYVRAGMPLSDGSITPEDILKIKGPSAVQQYLVNEVQEVYRLQGVKINDKHFEVVVR
QMMRKVRIQDPGDTIFLENQLAHKDDFITENDGIFAKKVVVEVGESDTLKAGQIITPRQL
RDENSVLRRNDKALVEARDAIAATATPILQGITRASLQTKSFISAASFQETTKVLNEAAV
AGKIDDLEGLKENVIVGHKIPAGTGMRDYDSIIVGSKEEYDEIMARKEEFKF
NT seq 4299 nt   +upstreamnt  +downstreamnt
atggctagacaaagagataataacacaataaaaaggttcgataaaatttcaataggcttg
gcctcaccagaatctattctggcagagtcaagaggagaagttttaaagcctgaaactatt
aactatagaacgcataaacctgagcgtgacggtcttttttgtgagcgtatttttggccca
gttaaagattatgaatgtgcttgtggtaaatacaagagaattcgttaccgtggtatcgtt
tgtgatcgttgtggggtagaagttaccgaaaagaaagtacgtagagatcgtgtaggtcac
attaacttagttgttcctgttgctcacatatggtatttccgttctttaccaaataaaatt
ggatacttattaggtttaccttctaagaaattagacatgatcatctattatgagcgttat
gttgtaattcaaccaggtattgctaaaggccctgaaggtgaagaaatcaataaaatggat
ttcttaactgaagaggagtatcttaatatattggaatcagttccagtagaaaatcaatat
ttagaagattctgaccctaacaagtttatcgctaaaatgggtgctgagtgtttaatagat
attttagcacgtatcgatttagatgtgctttcttatgaattaagacataaagcaaatact
gaaacttctaagcaacgtaagactgaagcactaaaaagacttcaagttgttgagtcttta
agagagtctcaagaaaatagagagaacagacctgagtggatgattatgaaagtaatccca
gttattccaccagaattacgtcctctagttcctttagatggtggtcgttttgcgacttca
gatttaaatgatctttacagaagagttattattcgtaacaaccgtctaaaaagattggtt
gagattaaagctcctgaagtaattcttagaaacgagaagcgtatgcttcaagaatctgta
gattctttattcgataacacaagaaaagcttctgctgttaaaacagaatcaaacagaccg
ttaaagtctctttctgattcattaaaaggtaaacaaggtcgtttccgtcaaaacttattg
ggtaaacgtgtagattattcagcacgttcagtaattgttgtaggaccagaattaagattg
tttgaatgtggtattcctaaggatatggctgcagaactttacaagcctttcgtaatacgt
aagttaatcgaaagaggtattgtaaaaacagttaagtctgctaagaagattatagataaa
aaagagcctgtagtttgggatattcttgaaaatgtattaaaaggtcacccagttttatta
aacagggctcctacattacaccgtttaggtattcaagcattccagcctaaattaattgaa
ggtaaagcgattcgtttacacccattagtatgtactgcatttaatgcggattttgatggg
gatcaaatggcggttcacttaccattaggtccagaagcaattctggaatgtcaattatta
atgttggcttctcacaatatattaaaccctgcaaatggttctccaattacggtaccatct
caggatatggtcttgggtctgtattatatgaccaaagaacgtaaatcaactcctgaagtt
cctgttaaaggtgaaggcttaattttctattctgcagaagaggtagttattgcccataac
gaaggaatggtagatttaaatgctggcgttaaagtaagagcaaaaaactttaatgaagct
ggtgagttggtgtatcaaattattccaactactgtaggtagagtattgttcaatagaatg
gtgccggagaaagctggttatattaacgaagtattaaataaaaaatctttaagagatatt
attggtggaattttagaggctacagatgtacctactactgctgatttcttggataagatt
aaaacaatgggttatgagttcgctttcaaaggtggtctttcattcagtttaggagatatt
attatcccacctgaaaagcatgaaatgattgctgatgctaatggacaagttgagggtatt
atggccaattataatatgggtcttattaccaacaacgaacgttataaccaagtaattgat
gtttggacatctaccaactcacagttgactgaattagcgatgaagcgtattcgtgaagat
caacaaggattcaactctgtgtatatgatgcttgattctggtgcgaggggttctaaagag
caaatccgtcagttaacaggtatgcgtggtttaatggctaagcctaaaaaatctactgcc
ggtggtggtgaaattattgaaaaccctattctttctaactttaaggaaggtctttcaatt
cttgaatactttatttctacgcacggtgcacgtaaaggacttgcagatacagcattaaaa
actgcagatgctggttacttaacacgtcgtttagtagatgtttcacaagatgttattatt
aacacagaagattgtggtacattaagaggtattgaagtagaagctttaaagaaaaatgaa
gaaattgttgaaactttaggagagcgtatattaggtagagtttctttacatgatgtatat
aatcctttgacggaagaattaattctaaaagcaggacaagaaatattagaagtagatgta
agattagttgaagcatctcctgttgataagatagaagtacgttctgcacttacatgtgag
gcagagaaaggtatttgtggtaaatgttatggtagaaacctttcaaccaataaaatggta
caaagaggtgaagctgtaggtgtagtagctgctcaatctattggagagccaggtacacag
ttaacgttacgtacattccacgtaggtggtattgcgggtaacatttctgaagacaacaag
ttatctgctaaatttggtggtgttgctgagattgaagatctaagaacagtaacgtctaca
gataatgagggtaatcctagtgaaattgtaatctctagaacttctgagattaaagttgtt
gatgctaaatctggtatcgttttaagtacgaataatatcccttacgggtctcagttattt
gttaagaacggatctaaagtcgctaaagatgaagtaatttgtcaatgggatccatataac
ggagttatcgtttctgaatttccaggaaagattgcttacgaaaatgttgatcaaggggta
acctatcaggtagaaattgatgagcaaactggtttccaagagaaagtaatttctgaatct
agaaacaaaaagttaatacctactttacttattatgaatagtaaagatgaagtattacgt
tcatacaacttaccagtaggttctcacattatggtagataacggtgagaaaattaaagaa
ggtaaaatcttagttaaaattccacgtaagtctgctaaatctggggatattaccggtggt
cttccaagagttactgaattgtttgaagcacgtaacccttctaatccagctgttgtttca
gagattgatggtgttgtttctttcggtaaaattaaaagaggtaaccgtgagattattata
gaatctaaattaggtgaggttaaaaagtatttagtaaaactttctaatcaaatattagta
caagagaacgattatgttcgtgctggtatgccactttctgatggatctataactccagaa
gatatcttaaaaattaaaggtccatctgctgttcaacagtatttagtgaacgaagttcaa
gaagtatatcgtttacaaggggtgaagattaatgataagcattttgaggtagttgtacgt
caaatgatgcgtaaagtaagaattcaagatccgggagatactattttcttagaaaaccaa
ttggcacacaaagatgattttatcacagagaatgatggaattttcgctaagaaagttgtt
gtagaagtaggagagtctgataccttgaaagcgggtcaaattattacaccacgtcagtta
agagatgaaaactctgtattgagaagaaatgataaagctttagtagaagctagagatgca
attgctgctacagcaacgccaatactgcaaggtattacacgtgcttcacttcagacgaaa
tcatttatctctgcggcctctttccaagagacaactaaagtattaaacgaagcagcagtt
gctggtaagattgatgatttagaaggcttaaaagagaatgttattgttggtcataaaatt
cctgcaggaacaggaatgagagattacgatagtataatcgttggttctaaagaagagtat
gatgaaataatggctcgtaaagaagaatttaaattctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (51)   

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