KEGG   Caldilinea aerophila: CLDAP_39510Help
Entry
CLDAP_39510       CDS       T01797                                 

Gene name
trpB
Definition
tryptophan synthase beta chain
Orthology
K06001  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
cap  Caldilinea aerophila
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:cap00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    CLDAP_39510 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CLDAP_39510 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    CLDAP_39510 (trpB)
Enzymes [BR:cap01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     CLDAP_39510 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
4951728..4953098
Genome map
AA seq 456 aa AA seqDB search
MSQQTKFILSERDIPEKWYNIVADMPNKPLPPLHPATHQPIGPADLAPLFPMELIKQEVT
TETWVEIPEEVREVYKLWRPTPLYRARRLEKALDTPAKIYYKYEGVSPAGSHKPNTAVPQ
AYYNMKEGVKRITTETGAGQWGSALAFACNLFGVGCEIYMVRVSYEQKPYRKIMMNTWGA
EVYASPSNRTNAGRQILAQDPDSPGSLGIAISEAVEVAATNEDAKYSLGSVLNHVLMHQT
VIGQEAIKQLEMAGDFPDIVIAPFGGGSNFAGISFPFLRYKLTEGKPIRAIAVEPTSCPK
LTRGVFRYDFGDTVGMTPLLPMYTLGHTFVPAKIHAGGLRYHGAGVIVSQLLKDGIIEAL
AIDQVETFEAGVLFARTEGIIPAPEANHAIAQVIREAKRAREEGVSKTILFNLCGHGHFD
LAAYEAYFEGRLQKHEMTQEEIEAALAAIDTPPIPA
NT seq 1371 nt NT seq  +upstreamnt  +downstreamnt
atgagccagcaaactaaattcatcctgtcggagcgcgatattcccgaaaaatggtacaac
atcgtagcggacatgccgaacaagccattgccgccgctccatccggccacgcaccagccg
atcgggcctgccgacctggcgccgctctttccgatggagctgatcaaacaggaggtgacc
accgaaacatgggttgaaatccccgaagaggtacgtgaggtgtacaaactgtggcgcccc
acccctctctaccgcgcccgtcgcctggaaaaagcgctcgacacgccggccaaaatttat
tacaagtacgaaggtgtcagccccgctggttcacacaagcccaacactgccgtgccccag
gcctattacaacatgaaagagggggtcaaacgcatcactaccgagacaggcgccggccag
tggggcagcgcgcttgcctttgcctgcaacctgttcggcgtcggctgtgaaatttacatg
gtgcgcgtttcttacgagcagaagccctatcgcaaaatcatgatgaacacctggggcgcc
gaagtatatgcttcgccctccaaccgcaccaacgccgggcggcaaattctggcacaggat
cccgattcgccgggcagcctgggcatcgccatctccgaggcagtagaggtagcggctacc
aacgaggatgccaaatattcgttaggcagcgtgctcaaccacgtgttgatgcatcagacg
gtgatcggacaggaagcgatcaaacaactggagatggcgggcgactttcccgacattgtg
attgctccctttggcggtggctccaacttcgccggcatctccttccccttcttgcgctat
aagctgaccgagggcaaaccgatacgcgccatcgctgtagagccgacctcctgcccgaag
ctcacgcgcggggtcttccgctacgatttcggcgacaccgtcggcatgacacctctgctg
ccgatgtacacgttggggcataccttcgtgccggcgaagattcatgccggcggactgcgc
tatcatggcgcaggggtcatcgtgagccagttgctgaaagatgggatcatcgaagcgttg
gccatcgatcaggtcgaaaccttcgaggcgggcgtgctcttcgccaggacagaagggatc
atcccggccccggaagcgaatcacgccatcgcccaggtcattcgcgaggcaaagcgtgcc
agggaagaaggggtctccaagacgattctcttcaacctgtgtggccatggtcactttgac
cttgcggcgtacgaagcctattttgaaggccgcctgcagaaacacgagatgacccaggag
gagatcgaagcggcccttgctgcgatcgatacgcctcccatcccggcgtaa

DBGET integrated database retrieval system