KEGG   Candidatus Paracaedimonas acanthamoebae: IM40_03925
Entry
IM40_03925        CDS       T03240                                 
Name
(GenBank) hypothetical protein
  KO
K08641  zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
Organism
caq  Candidatus Paracaedimonas acanthamoebae
Pathway
caq01502  Vancomycin resistance
caq02020  Two-component system
Brite
KEGG Orthology (KO) [BR:caq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    IM40_03925
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    IM40_03925
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:caq01002]
    IM40_03925
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:caq01011]
    IM40_03925
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:caq01504]
    IM40_03925
Enzymes [BR:caq01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.13  Dipeptidases
    3.4.13.22  D-Ala-D-Ala dipeptidase
     IM40_03925
Peptidases and inhibitors [BR:caq01002]
 Metallo peptidases
  Family M15: zinc D-Ala-D-Ala carboxypeptidase family
   IM40_03925
Peptidoglycan biosynthesis and degradation proteins [BR:caq01011]
 Peptidoglycan biosynthesis and degradation
  Carboxypeptidase
   IM40_03925
Antimicrobial resistance genes [BR:caq01504]
 Gene sets
  Vancomycin resistance modules
   Vancomycin resistance, D-Ala-D-Lac type [MD:M00651]
    IM40_03925
SSDB
Motif
Pfam: Peptidase_M15 VanY
Other DBs
NCBI-ProteinID: AIL12850
Position
756464..757171
AA seq 235 aa
MYFINMALDKTLPEGFAYLDVIDPSIQFSLRYYSHDNFIGKPIEGYLAERVIMTENAAKA
LCKAQALFKKDGYSIVVYDSYRPQTAVDHFSRWSQDATDQTMKALFYPRIDKADVFELGY
ISKKSGHSRGSTVDLSLIHESVNLKKITPTSRILNGSVEILFLDDGTLDMGSSFDLLDET
SHYQNNLINEEHFNRRTYLKEVMETCGFKPYAKEWWHFTLKDEPFPDTYFDFPVR
NT seq 708 nt   +upstreamnt  +downstreamnt
gtgtattttattaatatggctttagataaaactttgcctgaaggttttgcatatcttgat
gtaatagaccctagtattcaattctcgttgagatactacagtcatgataattttattgga
aaaccgattgaaggttaccttgcggagcgcgttattatgactgaaaatgcggcaaaagct
ttgtgtaaagcacaagcattatttaagaaggatggttattcgattgttgtttacgatagt
tatcgcccccaaacagcggttgatcatttttctcgttggagtcaagatgctacagaccaa
acgatgaaagccttattttatccccgtattgataaggctgatgtttttgaattggggtat
atttctaaaaaatctggtcactcacgtggcagcacagtcgacttaagtcttattcatgaa
agtgtgaaccttaaaaaaataacccctacttcccgaattttaaatggtagcgttgagatt
ctctttttagatgatggaacgcttgatatggggtcttcattcgatttattggatgaaaca
tctcattatcaaaataaccttataaatgaggagcattttaacaggcgaacgtatctaaaa
gaggttatggaaacctgtgggttcaaaccctatgcgaaagaatggtggcatttcacttta
aaagacgagcctttcccagatacttattttgatttccccgtgaggtaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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