KEGG   Candidatus Paracaedimonas acanthamoebae: IM40_04610
Entry
IM40_04610        CDS       T03240                                 
Name
(GenBank) aspartyl-tRNA synthetase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
caq  Candidatus Paracaedimonas acanthamoebae
Pathway
caq00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:caq00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    IM40_04610
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:caq01007]
    IM40_04610
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:caq03016]
    IM40_04610
   03029 Mitochondrial biogenesis [BR:caq03029]
    IM40_04610
Enzymes [BR:caq01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     IM40_04610
Amino acid related enzymes [BR:caq01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   IM40_04610
Transfer RNA biogenesis [BR:caq03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    IM40_04610
 Prokaryotic type
   Other AARSs
    IM40_04610
Mitochondrial biogenesis [BR:caq03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    IM40_04610
SSDB
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon
Other DBs
NCBI-ProteinID: AIL12947
Position
887449..889236
AA seq 595 aa
MHLYRTHKCNELRVEHVGSKVRLSGWVHRKRDHGDLLFVDLRDHYGITQCVIEAKNEHFK
TVEAAKLESVITVTGYVLQRPPETTNTKMPTGAIELTIEECNIDSIVDILPLSVNSDQEF
PEETRLRYRFLDLRREKMHQNIVLRSQIIASIRRRMIEQGFMEYQTPILTASSPEGARDF
LVPSRVHPGKFYALPQAPQMFKQLLMIAGFDRYFQIAPCFRDEDGRADRSPGEFYQLDFE
MSFVTQEDVFAALEPVLYGLFSEFGKNKIVTPAPFPRITYDDAMLKYGSDKPDLRNPLII
SQVNEVFENSEFSVFANAIAQGSVIRAIPALTAAKESRKFFDNLNDWAKTQGAPGLGYII
FSDGVAKGPIAKFLDEARLDRLRELTNVQEGDAVFFVCAPKKEAEKLAGLARQKLGQELD
LIEKNCFKFCWVVDFPMYEYNEDQKKIDFFHNPFSMPQGGIEDLLSKNPLEIRAYQYDIV
CNGYELSSGAIRNHKPEIMYKAFEIAGYTREEVEAQFSGMLNALKYGAPPHGGSAPGIDR
IVMLLAEEPNLREVVAFPMNQQAQDLLMGAPSEVTPKQLEELHIRVQLPPEQKIK
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgcatctttatcgcacacataaatgtaatgaattaagagtagaacacgttggctcaaaa
gttcgactttccggatgggttcatcgaaaaagagatcatggagatcttttatttgttgat
ttaagagaccattatgggattacccaatgcgtaattgaagcaaagaatgagcatttcaaa
acagtagaagcagcaaaacttgagagtgttattacagtgacaggatacgtacttcagcgg
cccccagaaacaacgaatactaaaatgccaactggagccattgaacttaccattgaagaa
tgcaatattgactcaatagtggatattttgccgttatctgttaacagcgatcaagaattt
cccgaagaaacaagactccggtatcgttttcttgatcttcgccgcgaaaaaatgcatcag
aatatcgtgcttcgcagccaaattattgcctcgattcgccgtagaatgattgagcaaggc
tttatggaatatcaaacaccaattttaacagccagctctccagaaggcgcaagagatttt
ttagtcccctcacgcgttcatccaggcaaattttatgctcttcctcaagcgcctcaaatg
tttaagcaactacttatgattgcaggctttgatcgctactttcaaatcgctccttgtttt
cgtgatgaagatggtcgcgccgatcgctctccaggagaattttatcaattagattttgaa
atgtcattcgtaacgcaagaagatgtttttgctgctcttgaacctgtattatatggtctt
tttagtgaatttgggaaaaataaaattgtaacaccagcccccttcccacgcattacatat
gatgatgctatgctcaaatatggatcggataagccagatttacgaaatcctctcattatt
tcgcaagtaaatgaagtttttgagaactcagagtttagcgtctttgcaaatgcaatcgct
caaggatccgtcattagagccatcccagcccttactgcggctaaagaatcacgaaaattc
tttgataacttaaatgactgggcaaaaacacaaggtgctccaggtctcggctatattatt
ttttctgatggagtcgcaaagggccctattgcaaaattcttagatgaagctcgtcttgat
cgcttgagagaattaacgaatgtccaagaaggtgacgctgttttttttgtttgtgcgccg
aaaaaagaggccgagaagcttgcaggcctagcccgtcagaaacttgggcaagaacttgat
cttattgagaaaaactgctttaaattctgctgggttgttgattttcccatgtatgagtat
aatgaagatcaaaagaaaattgattttttccataacccattctcaatgccgcaaggagga
attgaagaccttctttcgaaaaaccctttagagattcgtgcttaccaatatgatatcgtt
tgcaatggttatgagctttcaagtggagctattcgtaaccacaaacctgaaattatgtat
aaggcttttgaaatcgcaggctacacacgtgaggaagttgaagctcaatttagtggaatg
cttaatgcattgaaatatggagcaccacctcatggtggctctgcgccaggtattgatcga
attgtcatgcttcttgctgaagaaccaaatttacgtgaagttgttgcattcccaatgaat
caacaagctcaagatttattaatgggcgccccttcagaggtaacaccaaaacaacttgaa
gagcttcatattcgcgtgcaattaccacccgaacaaaaaataaagtaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (83)   
   KEGG ORTHOLOGY (1)   
   RefGene (80)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (101)   

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