KEGG   Candidatus Paracaedimonas acanthamoebae: IM40_06370
Entry
IM40_06370        CDS       T03240                                 
Name
(GenBank) Clp protease ATP-binding protein
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
caq  Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:caq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:caq03110]
    IM40_06370
Chaperones and folding catalysts [BR:caq03110]
 Heat shock proteins
  HSP100
   IM40_06370
SSDB
Motif
Pfam: AAA_2 zf-C4_ClpX AAA ClpB_D2-small AAA_5 Mg_chelatase AAA_22 MCM RuvB_N Sigma54_activ_2 Sigma54_activat AAA_7 AAA_14 IstB_IS21 AAA_16 Rad17 AAA_25 AAA_18 NACHT AAA_23 PduV-EutP TIP49 AAA_3 ABC_tran AAA_28 TsaE RNA_helicase nSTAND3 DEAD T2SSE ResIII AAA_24 PhoH AAA_33
Other DBs
NCBI-ProteinID: AIL13209
Position
complement(1224065..1225330)
AA seq 421 aa
MSKNDDSVKDTLHCSFCGKSQHEVKKLIAGPSVFICDECVDLCIEIIREENKVGGFSSNE
GGIPSPKEIVKVLNDYVIGQAHAKRVLAVAVYNHYKRINSIGRSNEIELAKSNILLIGPT
GCGKTLLAQTLARILDVPFTIADATTLTEAGYVGEDVENIILKLLQAAEYNVEKAQRGIV
YIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGGRKHPQQEFLQVDTT
NILFICGGAFAGLEKIIAARGKGSSIGFGADVKLPEDRRTGEILREIEPEDLLKYGLIPE
FVGRLPVVATLEDLNEESLIEILQTPKNALVKQYQKLFEMEKVRLEFTEDALSGIAQKAI
SRNTGARGLRSIMEDILLDTMFDLPGREDIEEVVINREVVEGRTEPLLVYGEKLKSKGSQ
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagtaaaaacgacgattccgttaaagatactcttcactgctctttttgtggaaaaagc
cagcatgaagttaaaaaattaattgctgggccaagtgtattcatctgtgatgaatgtgtg
gatttatgtattgaaattattcgagaagagaataaagttggaggattttcttcaaatgaa
ggtgggataccatcaccaaaagaaattgtaaaagttcttaatgattatgtgatcggtcaa
gcacatgcaaagcgtgttcttgctgttgctgtttacaatcattataaacgaattaactct
attgggcgttcaaatgagattgagcttgctaaatcaaatattcttctcattggtccaaca
ggatgtggaaagaccttattagctcaaacacttgctcgcatcttggatgtgccatttaca
attgcagatgcaacaaccttaactgaagcaggttatgtcggcgaagatgttgagaatatc
attttaaaacttctacaagctgctgaatataatgttgaaaaggctcagcggggcattgtt
tatattgatgaagttgataaaatttcacgaaaatccgataatccttcaattacgcgggat
gtatctggtgaaggtgtacagcaagccttgctcaaaattatggaaggtacaattgcttcc
gttccgcctcaaggtggccggaagcatcctcagcaagagtttttgcaagttgatactaca
aatattctgtttatttgtggtggagctttcgcaggacttgaaaaaattattgcggctcgt
gggaaaggttcatccattggttttggagccgatgtaaagttacctgaagatcgtcgtacg
ggtgagattttacgtgaaatcgagccagaagaccttttgaagtatggccttattcctgaa
tttgtagggcgtttacctgtcgttgctacgctcgaagacctaaatgaagagtcactcatt
gaaatcttgcaaacaccgaaaaatgctcttgtaaaacaatatcaaaagctttttgaaatg
gaaaaagttcgtttagagtttactgaagatgctttatctggaattgcgcaaaaagcgatt
tcaagaaatactggggctcgaggacttcgttcaattatggaagatatcttgcttgatacc
atgtttgatcttcctgggcgagaggacattgaagaagttgtcattaaccgagaagttgtg
gaaggtagaactgaacctttgctcgtctatggcgaaaaattaaaaagcaaaggaagtcaa
gcgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (34)   
   Pfam (34)   
All databases (80)   

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