KEGG   Collimonas arenae: LT85_0923
Entry
LT85_0923         CDS       T03512                                 
Symbol
cmeB
Name
(GenBank) RND efflux system
  KO
K18138  multidrug efflux pump
Organism
care  Collimonas arenae
Pathway
care01501  beta-Lactam resistance
care01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:care00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    LT85_0923 (cmeB)
   01503 Cationic antimicrobial peptide (CAMP) resistance
    LT85_0923 (cmeB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:care02000]
    LT85_0923 (cmeB)
   01504 Antimicrobial resistance genes [BR:care01504]
    LT85_0923 (cmeB)
Transporters [BR:care02000]
 Other transporters
  Electrochemical potential-driven transporters [TC:2]
   LT85_0923 (cmeB)
Antimicrobial resistance genes [BR:care01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    LT85_0923 (cmeB)
SSDB
Motif
Pfam: ACR_tran MMPL
Other DBs
NCBI-ProteinID: AIY40081
UniProt: A0A0A1F6B6
Position
complement(1041865..1045017)
AA seq 1050 aa
MGKFFIDRPVFAWVLAIFILLGGALAITQLPVAQYPSIAPPTIVVSAAYPGATAQTIDDS
VTSLIEQEMNGADGLQYIESQSQADGSVSITVTFSPETNADLAAVDVQNRLKRVEARLPA
VVTQNGVQVTKSRSNFLMFIGLSSTDGKLDPIALGDYLSRNVLNEIKRVPGVGQAQLFGT
ERAMRIWIDPAKLVGLNLTPADVTAAITAQNALVAGGTLGDLPSPGSQQISATVVATGQL
NTVEQFGKIQLRANSDGSIVRLRDVARIEIGGQSYATAGRLDGKPTSFVGVQLSPTANAL
GTATAVKAKMKELSKYFPAGVTYEIPYDTSKFVKISIEEVVKTLVEAIILVFLVMYLFLQ
NIRYTLIPTVVVPVALMGTFATLLLFGFSINVLTMFGMVLAIGILIDDAIVVVENVERIM
SEEGLSPREATRKAMGQITGALIGITLVLIAVFIPMAFFSGAVGAIYRQFSLSMVASMVF
SVLMAFTLTPALCATILKPVEKGHHHEKTGFFGWFNRKFNATTNSYQGFVAKMLTKTGRY
LVVYGAILICVGVLYTRLPASFLPSEDQGYIVTNVQLPAGASSNRTLEVIKQIEAYYGKL
PAVANVVAITGFSFSGNGQNAGLVFTPLKDWSERGPAESADAIAGKAFGVFSQIKDAIVY
PLNPPPIPELGNATGFTFRLQDRSGQGHAALTAARNQLLGMASQSKILAGVRPEGLEDSP
QLQLNIDRDKANALGVSFSAINSTLSTALGSSYVNDFPNQGRQQRVIVQADAPQRLQPED
LARLYVKNTQGTMVPFSSFTSSEWTKGPVQLTRYNGYPAMKISGGASPGHSTGEAMDEME
ALTAKLPPGFGFEWTGQSLEEKTSGSQAPMLYLLSLIAVFLVLAALYESTSIPLAVMLVV
PLGILGALLGVTLRGMPNDVYFKVGMITVVGLSAKNAILIIEFAKDLQAEGKGLIEATLE
AVHLRFRPILMTSFAFILGVLPLAIKTGAGSGSQRAIGTGVMGGMITATVLAVFLVPVFF
VVVRRFFKGSERLQKLHDANKKIDVESQHV
NT seq 3153 nt   +upstreamnt  +downstreamnt
atgggcaagtttttcatcgatcgccccgtatttgcgtgggtgctcgcgatattcatcctg
ctcgggggtgctctggcgatcacgcagttaccggtggcccagtatccttcgattgcaccg
ccgacgattgtcgtcagcgctgcttatcccggcgccaccgcgcaaaccattgacgatagc
gttaccagcctgatcgaacaggaaatgaacggcgccgatggcttgcagtacatcgaatcg
caaagccaggccgacggctcggtatccatcaccgtgacgttttcgccagaaaccaacgcc
gacctggctgcggtggatgtgcaaaaccgtctgaaacgcgtggaagcgcggctcccggca
gttgtgacccagaatggcgtacaggtcaccaagtcgcgcagtaacttcctgatgtttatc
ggtctctcgtcgaccgacggcaagcttgatccgattgcgttgggcgattatttgtcgcgc
aacgtgctcaatgaaatcaaacgtgtgcctggcgtcggtcaggcacagctgttcggtacc
gaacgcgccatgcggatctggatcgaccccgccaagctggtcggtctcaacctgactccg
gcggacgtcaccgccgccatcaccgcgcaaaatgcgctggttgcgggcggtacgctgggt
gatctgcctagccctggctcgcagcagatttctgcaaccgtggtggcgaccggccagttg
aataccgtcgaacagttcggcaagatccagctgcgcgccaattcggatggttccattgtc
cgtctgcgcgatgttgcgcgtattgaaatcggtggccagtcgtatgccactgccggccgt
ctggacggtaagccgacttccttcgtcggtgtgcaattgtcgccaactgcgaatgctttg
ggcaccgcaacggcagtcaaagccaagatgaaagagctgtccaagtacttcccggccggc
gttacctacgagatcccttacgatacgtcgaaattcgtcaagatttcgattgaagaagtg
gtcaagactttggtggaagcgatcatcctggtgttcctggtgatgtacctgttcctgcag
aacatccgctataccctgattccgacagtggttgtgccggtcgcgctgatgggtactttc
gccacgctgctgctgttcggcttctcgatcaacgtcctgaccatgttcggcatggtgctg
gcgatcggtatcctgatcgacgatgcgattgtggtggtagaaaacgtcgagcgcatcatg
agcgaagaaggtttgtcgccacgtgaagcaacccgcaaggcgatgggccagatcaccggc
gcgctgatcggtatcacgctggtgctgatcgccgtgttcatccctatggcattcttcagc
ggcgcggtgggtgcgatttatcgccagttctcgttgtcgatggtagcttcaatggtgttc
tcggtattgatggcgttcacgctgacgccggcactgtgcgccaccatcctgaaacctgtg
gaaaaaggccatcatcacgaaaaaacaggcttcttcggctggttcaaccgcaagttcaac
gctactaccaacagctatcagggctttgtcgccaagatgctgaccaagaccggtcgctac
ctggtggtgtatggcgccatcctgatctgcgttggagtgttgtacacccgtctgccagca
tcattcctgccaagcgaagatcagggctatattgtcactaacgtgcaattgcctgccggc
gccagcagcaaccgcaccctggaggtgatcaagcagatcgaagcgtattacgggaaattg
cctgcggtagccaatgtggtggcgattaccggcttcagcttctccggtaacggtcagaat
gccggcctggtattcacgccgctcaaggactggagcgagcgtggacctgctgaatcggct
gacgcgattgccggcaaggcatttggcgtgttctcgcaaatcaaggacgccatcgtctat
ccgctgaatcctccgccaatcccggaactgggtaacgctaccggctttaccttccgcctg
caagaccgttcgggacaaggacatgcggcattgaccgctgcacgcaatcagttgctcggc
atggcttcccaaagcaaaattttggcaggggtgcgacctgaaggtttggaagattcgccg
cagctgcaactcaatatcgaccgcgacaaggcgaatgcgctgggcgtatcgttcagcgcc
atcaacagcacgctgtcgactgcactcggttcgtcctacgtcaatgacttccctaaccag
ggacgccagcaacgcgtgatcgtgcaagcggatgcaccgcaacgcctgcaaccggaagac
ctcgccaggctgtatgtcaagaacacccagggcaccatggtgccgttctcgtcattcacc
agctcggagtggaccaagggccctgtgcaactgacgcgttataacggctatccggcgatg
aaaatctccggcggcgcctcgcctggccatagtactggtgaagccatggatgaaatggaa
gcactgactgccaaactgccgccaggcttcggctttgaatggacaggccagtcgctggaa
gaaaaaacgtccggttcgcaagcgccgatgctgtacctgctgtcgctgatcgccgtattc
ctggtgctggcggcgttgtatgaaagcacttcgattcctctggcagtgatgctggtggtg
ccgctgggtattctcggtgcgttgctgggcgtgactttgcgcggcatgccgaacgacgtc
tactttaaggtcgggatgattaccgtggtcggtttgtcggcaaagaacgcgattctgatc
atcgaattcgctaaagatttgcaagctgaaggcaagggcctgatcgaagctaccctggag
gcagtccatctgcgcttccgtccgatcctgatgacgtcgtttgcgttcatcctcggcgtg
ttgccgctggcgatcaagaccggcgccggttcaggcagccagcgcgcaatcggtaccggc
gtcatgggcggcatgatcacagcgacagtcctggccgtgttcctggtgccggtgttcttc
gtggtggtgcgcaggttcttcaaaggcagcgaacgcctgcagaagctgcatgatgccaac
aaaaaaatagatgtggagagtcagcatgtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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