KEGG   Collimonas arenae: LT85_3113
Entry
LT85_3113         CDS       T03512                                 
Name
(GenBank) General secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
care  Collimonas arenae
Pathway
care03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:care00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LT85_3113
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:care02044]
    LT85_3113
Secretion system [BR:care02044]
 Type II secretion system
  General secretion pathway protein
   LT85_3113
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: AIY42271
UniProt: A0A0A1FCS5
Position
3504810..3507032
AA seq 740 aa
MFRAAFIVILLVCTTRVQPVFGVPTKVNLTDGTADQATMSFVGADIESVIKAIGQYTNTT
FIIDPRVKGTINLVSEMPIGKNQAFDLLASTLRLQGYTVVRGDGFVKVVPEADAKLQVAS
TRETSVRGDQIATQIFTLNYESAANILPVLRPLISPNNTINANPGNNTLVVTDYAENLRR
LGKMIAALDVPAASDMDIVPIRYAIASDVAVLLSKMLDSGGTTGTNPSDSTRTMILADPR
TNSLLIRAPSIGRANLAKSLIAKLDQATTSAGNIHVVYLKNADAVNLAKTLRSITSFDTS
TLTSESSGRASSGKMLQSSSTGNSGGMSQTSGAGASDATASNSAPSEKSLSSSGGSAAGF
IQADRTTNTLIITASDPVYRNLRSVIDQLDTQIAQVHVEALIVAVTDSAASEIGVQWAAL
SGDKNSSYRRFAGTGFTGNQTGVNPTNPSANLLSAGIASAFKNNSGTPTTIGGGMQIGII
RQIAGQIGLGALASALNGTNGGNVLSLPSLTVEDNHEAKMLDGKNVPVTSGSQLQVGNAN
SVPFNTVDRKDVGTALKITPHILSGGTMRLEIAQEVSSVDSVSAAATQNLGPTFTTRSMN
TTVVVNDGDIVALGGLIQDNHQSNVQKVPWLGDIPLIGNFFKYQSASRDKTTLMIFLRPS
IIRSQQDNDAVVASRYDYLRTAQIKVQPDKSILTDFGSSVLPRLEDGGPFIDLRKSLNSK
ETPSSSTVAPTQDLLNNKLE
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgtttcgcgccgcttttattgttatcttgctggtctgtacgactagagtacaaccagtg
tttggagtgccaactaaagttaatttgaccgatggcacagcagaccaggcaacgatgagt
tttgtgggtgcagacattgagtctgtcatcaaggcaattgggcagtacaccaatacgacc
ttcatcatagatccgcgcgtcaaagggaccatcaatctggtatcggaaatgccaattgga
aaaaatcaggcttttgatttactggcatcaacccttagattgcagggctatacggtagtg
cgtggtgatggtttcgtaaaggtagtgcctgaagcagatgccaaactccaggtcgcgtcg
acccgcgaaacaagcgtcaggggagaccagattgcaacacagatttttacgctgaactac
gaatctgccgcaaatattttacccgttctgaggccgttgatttcgccaaacaatacaatc
aacgccaaccctggcaacaacaccttggtggtgaccgattacgcggaaaatctgcggcgt
ctgggaaaaatgattgcagcgctcgacgttccagcagctagcgatatggatatagtacca
atacgctatgctattgccagcgacgtcgctgtactgctcagtaaaatgctggattcggga
ggcacgactggtaccaatcccagcgatagtactcgcactatgattctggccgatccacgc
accaattcgctgctcattcgggcaccgtccatagggcgtgccaacttggccaaatcattg
atcgcaaagcttgaccaagcaactaccagcgcaggaaatatccacgtagtttacttaaag
aatgccgatgccgttaatctggcaaaaaccttacgctccatcacatcctttgacacttcg
acactaacatcagagtcgtctggacgcgctagctcgggaaaaatgctgcaaagctcgagc
actggaaattcaggaggtatgtcgcagacttcaggtgcaggagcttcagatgctacagct
tcaaattccgcgccttccgagaagtcattgtcgtcaagcggaggaagcgcagcaggcttt
attcaggcagatcgcaccaccaataccttgatcattacggcgagcgatccagtctatcgc
aaccttcgcagcgtgattgatcagctcgatacacaaattgctcaagttcatgttgaagcg
ctgatagttgcagtaacggactctgctgcaagtgaaatcggtgtgcaatgggcagccctg
agcggagacaagaatagctcttaccgcagatttgctggcaccggatttactggcaaccaa
acaggagtcaatcccaccaatccgagtgcgaacttactcagcgcaggaattgctagtgct
tttaagaacaattcgggcaccccaacaactatcggtggcggcatgcaaattggcataatt
cgccagattgccggtcaaataggtcttggcgcactagccagcgctctaaacggtactaat
ggcggcaatgtattatcacttcccagtttaactgtggaagacaatcatgaagcgaagatg
ctagacggaaaaaacgtccccgttacatctggctcgcagcttcaagttggaaacgccaac
agcgttccattcaatacagtcgatcgaaaggatgtcggcaccgcattgaaaataacaccg
catattttatcgggtggcactatgcgcctggaaattgcgcaagaagtttcatcagttgac
agtgtttccgcagctgcaacacaaaatttaggccccaccttcactactcgctccatgaat
acaaccgttgtggttaacgacggcgatattgtcgcactgggcggcttgattcaagacaat
caccaaagcaacgttcaaaaagtaccatggctgggagatatcccgcttatcggcaatttc
ttcaaatatcaatctgcctctcgcgacaaaactacgttgatgatattcctccgtccctcc
attattcgttcgcagcaagataacgacgctgtggtagcaagccgttacgactatctccga
accgctcagatcaaagtgcagccggataaaagcatattgaccgacttcggctcctcagtt
ctgccacgcttggaagatggtgggccatttatcgatttacgcaaatctctcaacagtaaa
gagacgccatctagctcaacagttgctcccacacaggatctactgaacaataaattggaa
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system