KEGG   Clostridium argentinense: RSJ17_05615
Entry
RSJ17_05615       CDS       T05123                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
carg  Clostridium argentinense
Pathway
carg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:carg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RSJ17_05615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:carg03400]
    RSJ17_05615
DNA repair and recombination proteins [BR:carg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RSJ17_05615
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RSJ17_05615
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 BrxC_BrxD DUF87 AAA_7 nSTAND3
Other DBs
NCBI-ProteinID: ARC84043
Position
1080440..1082413
AA seq 657 aa
MNEFKIHSKFKPMGDQPQAIESLSDGIIESKKFQTLLGVTGSGKTFTMANIIEKVQKPTL
VLAHNKTLAAQLCSEFKEFFPENAVEYFVSYYDYYQPEAYVAQTDTYIEKDASINDEIDK
LRHSATSALLERKDVIVVASVSCIYGLGNPEEYKKLTVSIREGMEKERNEIIRQLVDIQY
ERNDINFVRGTFRVRGDVLDIFPASSTNRGIRIEFFGDEVDRIREFDVLTGEIIAGRKHI
SIFPASHFATSKDKLELAISQIEQELEVRLEELKDQDKLLEAQRLKQRTNFDIEMIREVG
YCTGIENYSRILDGRAKGTPPQTLLHYFPDDFLLFIDESHVTLPQIRAMYGGDKSRKTSL
VEYGFRLPSAYDNRPLQFEEFEEILNQVVFVSATPSKYEAEHSENVAEQIIRPTGLLDPE
VIVKPIKGQIDDLYSEIRNTIDKGFRVLVTTLTKKMAEDLTKYFKDLGVKVTYLHSDIDT
IERMKIIRDLRKGEVDVLVGINLLREGLDIPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNSESKVIMYGDNITNSMEKAIGETNRRREIQMEYNEKHNITPKTVMKDIREILEISTV
AEETVEYTSDDKDRGIDLTSYINKLEEEMKQAAKDLQFERAAQLRDEIIKLRKEIKS
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgaatgaatttaaaatacattctaagtttaaacctatgggtgaccaaccacaggctatt
gaaagtttatctgatggaataatagaaagcaagaaatttcaaactttattaggggttact
ggttcagggaaaacttttactatggctaatataatagaaaaagtccaaaaacctaccttg
gtattagcacataacaaaactttagctgcacaactttgttcagaatttaaggaatttttt
cctgaaaatgctgttgaatactttgtatcttactatgattattatcaaccagaggcttat
gttgctcaaaccgatacatatatagaaaaagatgctagtataaatgatgaaattgataaa
ttaagacactctgctacatctgctcttttagaaagaaaagatgttatagtagttgcgtca
gtatcttgtatttatggattaggtaatccagaggagtataaaaaacttactgtttccatt
agagaaggtatggagaaagaaagaaatgaaataattagacaacttgtagatattcagtat
gaaagaaatgacattaattttgtaagaggtacttttagagttagaggtgatgtcttagac
atatttccagcatcatctactaacagaggtattagaatagaattttttggagatgaagta
gatagaattagagagtttgatgtattaacaggagaaataatagctggtagaaaacatata
tctattttccctgcttctcactttgccacctcaaaggataaattagaattagctatatct
caaattgaacaagaattagaagtgagattagaagagcttaaagaccaagacaaactttta
gaagcacaaagattaaagcaaagaactaactttgatattgaaatgataagagaagttggg
tattgcactggtatagaaaactattcaagaatattagatggaagagctaaggggacacca
ccacaaactttattacattattttccggatgatttcttgttatttatagatgaaagccat
gttactttacctcaaataagagctatgtatggtggagataaatcaagaaaaacttctctt
gtagaatatggttttagattaccttctgcttatgataataggccattacagtttgaggaa
tttgaagagattttaaaccaggtggtatttgttagtgctaccccttcaaaatatgaagct
gaacattcagaaaatgtagcggagcaaattataagacctacgggacttttagatcctgaa
gttattgttaagcctataaaaggtcaaatagatgatttatatagtgaaattagaaatact
atagataaaggtttcagggtattagttacaactcttacaaagaaaatggcagaggatttg
actaaatattttaaggacttaggtgttaaagttacatatcttcactcagatatagatacc
attgaaagaatgaagattataagagatttaagaaaaggtgaagttgatgttttagttgga
attaatcttttaagagaaggattggatattccagaagtagctttagttgccatattagat
gcggataaggaaggcttcttacgttcagaaacttctttgattcaaactataggaagggca
gcaagaaactctgaaagtaaggttataatgtatggtgacaacataactaactctatggaa
aaagctataggagaaacaaatagaagaagagaaatacaaatggagtataatgaaaaacat
aacattacccctaaaactgtaatgaaagatataagagaaatattagaaatttcaactgta
gcggaagaaacagttgaatatactagtgatgacaaagatagaggaatagatttaacttct
tatattaacaaattagaagaagaaatgaaacaagctgcaaaagacctacaatttgaaaga
gctgcacagcttagagatgaaattattaaattaagaaaagaaattaaaagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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