KEGG T01256: CA2559

Croceibacter atlanticus: CA2559_02270

Entry

CA2559_02270 CDS T01256

Definition

DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

cat Croceibacter atlanticus

Pathway

cat03410	Base excision repair
cat03420	Nucleotide excision repair
cat03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:cat03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:cat03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:cat03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme DUF762

Other DBs

NCBI-GI:

298207041

NCBI-GeneID:

9295939

UniProt:

A3U5M6

Position

complement(544098..545690)

AA seq 530 aa
MKQFASLIKTLDSTNKTTKKVEALTQYFKTANAKDKLWTIAILSHRRPPRPVNTTLLRQW
ASELSGIPLWLFEESYHIVGDLAETIALVIPNAEEDSEKPLSQFLEEIVALKPRSEEEKK
EYVVENWTSLNYYERFVFCKLITGSFRIGVSQKLMTRALSKATEIDEDILAYKLMGDWTP
KSTTFQELILEENEEDYLSKPYPFYLAYAIEGEPKDLGNVKDWSAEHKWDGIRSQVIIRN
DELFVWSRGEELVTDKYPEFKVFTEAIPNGTVIDGELLPFPNGEIGSFNDMQKRIGRKTV
SKALLKKVPVILKAYDLLEWQGEDLRSKPFIERRKVLETLVNYVQTETLPLQLSERMSFS
SWEEMAKERETSRDKKSEGLMLKRLDSPYLVGRKKGDWWKWKVDPLTIDGVLTYAMRGHG
RRSNLFTDYTFGLWNDDKTELVTFAKAYSGLTDAEFRKVDAWIKKNTIERFGPVRSVKPH
HVFEIAFEGIAESKRHKSGVATRFPRILRWRQDKPLEEANTLEDLKRLIP

NT seq 1593 nt +upstreamnt +downstreamnt
gtgaaacagtttgcatcacttattaagacgcttgatagtacaaataaaaccacaaaaaaa
gttgaggctttaacacagtactttaaaacagcaaatgcaaaagacaaactctggacaatt
gccattctgtctcacagaaggccaccaaggccagtaaacacaacattgttacgccaatgg
gcaagtgagctgtctggaattccattatggctttttgaggagtcataccatattgtagga
gacttggcagaaacaatagcattagtaattcctaatgcagaagaagactcagagaagccc
ttatctcagttcttagaagaaatagttgccttaaaaccccgaagtgaagaagagaaaaaa
gaatatgtagttgaaaactggacgtccttaaactattatgaacgttttgtgttctgtaaa
cttattactggtagttttaggattggtgtaagccaaaaattaatgacacgagcattatct
aaagctacagaaatagacgaagatatcttggcctataaacttatgggagattggactcca
aaatccactacttttcaggagttaattttagaagaaaatgaagaagactacctaagtaag
ccctatccattttatctagcttatgctatcgaaggtgaaccaaaagatttaggtaatgta
aaagattggagtgcagaacataaatgggacggtatacgaagccaagttattataagaaat
gacgagctttttgtgtggagtagaggcgaagagttggtaacagataaatatccagaattt
aaagtgtttacagaggcaatacctaatggcactgttatagatggtgagttgctccctttc
cccaatggagaaattggctcttttaatgatatgcaaaagcgtattggtagaaaaacagtg
tctaaggcgcttttaaagaaagtgcctgttatcttaaaggcttatgatttattagagtgg
caaggagaagacttaagatctaaaccatttattgaacgtagaaaggttttagaaacttta
gttaattacgttcagacagaaacattgcctttacagctaagtgagcgtatgagtttttcc
tcttgggaagaaatggctaaagaacgagaaacgtcaagagataaaaaatctgaaggcttg
atgctaaaacgactagattctccgtatttagttggtaggaaaaaaggtgattggtggaag
tggaaagtagatccattaacaattgatggcgtattaacttacgcaatgagaggtcatgga
agacgaagtaacctgtttacagactatacgtttggattatggaatgatgataaaacagaa
cttgtaacctttgcaaaagcctattctggacttacagatgctgagtttagaaaagttgat
gcttggattaagaaaaatactattgagcgctttggtcctgtaagaagtgtaaagcctcat
catgtttttgaaattgcttttgaagggattgcagagtccaaaagacacaaaagtggagta
gctacccgttttccgagaattttaagatggcgacaagataaacccttagaagaggcaaat
actttagaagatttaaaacgcttaattccttaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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