KEGG   Croceibacter atlanticus: CA2559_04615
Entry
CA2559_04615      CDS       T01256                                 
Name
(GenBank) putative DNA polymerase III alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
cat  Croceibacter atlanticus
Pathway
cat03030  DNA replication
cat03430  Mismatch repair
cat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CA2559_04615
   03430 Mismatch repair
    CA2559_04615
   03440 Homologous recombination
    CA2559_04615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cat03032]
    CA2559_04615
   03400 DNA repair and recombination proteins [BR:cat03400]
    CA2559_04615
Enzymes [BR:cat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CA2559_04615
DNA replication proteins [BR:cat03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CA2559_04615
DNA repair and recombination proteins [BR:cat03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CA2559_04615
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 RNase_T HHH_3 Intimin_C T2SSK
Other DBs
NCBI-ProteinID: EAP88012
UniProt: A3U6Z5
Position
complement(1045097..1049461)
AA seq 1454 aa
MYLIFDTETTGLPKNYNAPITDTDNWPRCIQIAWQLHDDMGKLVSHDDMLIKPDGFNIPY
DSEQIHGISTELADKNGVDLVDSLHKFNEALKQTKFVVGQNVAFDINIMGAEFYRKGIDN
PLQELPVLDTCTETTAELCKIPGGRGGKFKLPTLTELHQFLFNKAFNEAHNATADVEATT
RCFLELIRKRIYTAEELDVSPDYFENFSEENPQTIQLIGLKHINLKKASEQIRKALEKEQ
GVDEISEEELEENIAVLEEVTFSHLHNHSQFSVLQSTMSIQDLVDNAIANNMPGVALTDH
ANMMGAFHFVRAVNTYNKSLAGSEDLDKKPLKAIVGCEFQVCEDHNDKSRQDNGYQIVML
AKTKKGYHNLAKMASIAYTEGFYYVPRIDRAVVEKYKEDVIVLTGNLYGEVPSKVLNVGE
KQAEESLLWWKSHFEEDLYMEIMRHDQEDERRANEVLIKLAKAHDIKIVASNNTYYTAKG
DANAHDILLCVKDGEKQSKPIGRGRGYRYGLPNQEYYFKSNDEMKALFKDLPEAITNTQD
VVNKIEGFDLARDVLLPAFEIPEKFKDSKDLDDGGKRGENAFLKHLTYEGAKERYGEITP
EIKERLDFELSIIEKTGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSAVAYCLKITNI
DPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRSRVMDYVIKKYGSDQVAQIITYGTMAAK
SAIRDTGRVLDLPLHETDKIAKLIPDMTKLGKIFGVDEKELSRKFRSEDFEGVKELLSIS
GGNDLQAQTVNQARVLEGSVRNTGVHACGVIITPDDISNFVPIARSKDGELYITQFDNSV
VEDAGLLKMDFLGLKTLTLIKDTVKIVKAKHGVQLDPDSFPLDDEKTYELFQRGETVGIF
QYESPGMQKHMQSLKPTVFDDLIAMNALYRPGPMEYIPSFIARKHGDEDIEYDLPAMEEY
LKETYGITVYQEQVMLLSQKLADFTKGEADILRKAMGKKQKAVLDKMKPKFIEQASAKGH
DAEKLEKVWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSNNMSNIKQ
VTFFMEECRRMKLDVLGPDVNESFRKFSVNKEGAIRFGMAAIKGVGSSAVESIVAERKEN
GHFKSIFDMAKRIDLRAANKKAFENLALAGGFDSFQDTHRAQYFLDEGDGITFLEKVIRY
AAKYQENKNSSQVSLFGEASEVQIPEPVVPPCEEWGTMEKLRKERDVVGMYISGHPLDDY
NIEMKSFCNANLNYLEDLQQVLNAELSLACILTDIRHLTTKTNKGWAIFTAEDYHNTYEF
KIYGEDYLKYRHLLIPNSFLYVKAFIREGFTNRQTGKKSDPRIQFNNFEMLQDVLERYAR
KLTIQINVNELKGDDIQSLKSILDEHKGDKLLNFVVYEMEDKVKLHMPSRKHKININKDL
LSTLQNKAVHYKLN
NT seq 4365 nt   +upstreamnt  +downstreamnt
atgtatttaatatttgatactgaaacaactggtttacctaaaaattacaacgctccaata
acagatacagataattggccacgttgtatacagatagcttggcagcttcatgatgacatg
ggtaagttggtgtctcacgatgatatgcttataaaaccagacggttttaatatcccgtat
gactcagagcaaattcacggtatttctacagagttagcagataaaaatggtgtagacctg
gtagactcacttcataaatttaatgaagcattaaaacagacaaaatttgttgtaggacaa
aatgttgcgtttgatattaatattatgggtgccgagttttacagaaaaggcatagacaac
ccattgcaagaactacctgttttagacacttgtacagaaaccacagcagaactttgtaaa
attcctggtggacgtggcggaaaatttaaactgcctacccttacagaacttcaccaattc
ttatttaacaaagcttttaatgaagctcacaatgccactgcagatgttgaggcaacaacg
cgatgctttttagaacttataagaaagcgtatttatacagctgaagagttagacgtgtct
ccagattattttgagaatttttctgaagaaaacccacagacaattcaacttatagggtta
aagcatattaacctcaagaaagcttcagaacaaataagaaaagctcttgaaaaagaacaa
ggagtcgatgagatatcagaggaagagctagaagaaaacattgcagtcttagaagaagtt
acgttttcccacttacacaatcatagccaattctctgttcttcagtctacaatgagtatc
caggatttagtagacaatgctatagctaataatatgcctggtgtagcactcacagaccac
gccaatatgatgggtgcttttcattttgtgagagccgttaatacttataacaaatcttta
gcaggtagtgaagacctagacaaaaagcctttaaaagccattgtaggttgtgagtttcag
gtctgtgaagatcacaatgataaatccagacaggataacggttaccagatagtaatgctt
gcaaaaactaaaaaaggctaccataatttggctaagatggcatctatagcttatacagaa
gggttttattatgtaccaagaatagacagagctgttgtagaaaaatacaaagaagatgta
attgttttaacaggaaacctatatggagaggtaccaagtaaggttttaaatgtaggagaa
aagcaagccgaagaatctttactttggtggaaatctcattttgaagaagatctttacatg
gaaattatgcgccatgaccaagaagacgagcgtcgtgctaatgaggttttaataaaacta
gccaaagcgcacgacataaaaatagttgcaagcaacaatacctattacacagcaaaagga
gatgctaatgctcatgacattttactttgcgtaaaagatggagaaaagcaaagcaaacct
attggccgaggacgtggttatcgttatggtttacccaaccaagaatactattttaagagt
aatgatgaaatgaaggctttatttaaagaccttccagaagcaattaccaatacgcaagac
gttgtaaataaaattgaagggtttgatcttgctagggacgttttattaccagcctttgaa
attcctgaaaaatttaaagattctaaagatttagatgatggtggtaaacgaggcgaaaat
gcatttttaaaacaccttacttatgaaggtgcaaaagaacgttatggagagataactcca
gagattaaagagcgtttagattttgagctatctattattgaaaaaacagggtatcctgga
tattttctaattgtagaagactttattagagaagcaagaaacatggacgtttctgttggt
ccaggtcgtggttctgctgctggtagtgccgtagcttattgcttaaaaattaccaatata
gaccctattaaatacgatctactttttgagcgtttccttaatccggatcgtgtaagtatg
cccgatattgatattgattttgatgacgaaggtcgaagccgtgtcatggattacgtaatt
aaaaaatatggtagtgatcaagtagcacagattataacttacggtactatggcagcaaaa
tctgccataagagataccggtcgtgttttagatttaccgttgcacgaaacagataagatt
gccaaacttattccagatatgactaagcttggtaaaatatttggcgtagatgaaaaagag
ctctccagaaaatttagaagtgaagattttgaaggcgtaaaagaacttttaagcatttca
ggcggaaatgatttacaggctcaaaccgttaatcaggctcgtgttttagaaggttctgta
agaaatactggtgtacacgcttgtggcgttataatcacaccagatgatatctccaacttt
gttcctattgcaaggtctaaggatggtgaattatacatcacacaatttgacaattctgta
gtagaagatgctggactacttaaaatggatttccttggtctaaaaacacttactcttatt
aaggataccgtaaagattgtaaaagcaaaacacggcgtacaattagacccagacagtttt
cctttagatgatgaaaaaacgtatgaactattccaacgtggtgaaaccgtaggtatattt
caatatgaatctccaggaatgcagaaacatatgcagtctttaaaaccaacagtctttgat
gaccttattgcaatgaacgcgctttatcgtccaggaccaatggaatatataccaagtttt
attgccagaaaacacggtgatgaagacatagagtatgatttacctgcaatggaagaatat
cttaaggaaacttatggtattacggtttaccaagagcaagtaatgcttttatctcaaaag
cttgcagattttacaaaaggtgaagcagatatccttcgtaaagcaatgggtaagaagcaa
aaagctgtactcgataaaatgaaacctaaatttattgagcaggcttcagctaaaggtcat
gatgcagaaaaattagaaaaagtgtggaaagactgggaagcctttgcaagttatgctttt
aataaatctcactctacttgttatgcctggattgcctaccaaacagcctaccttaaagca
cactatcctgcagaatatatggctgcggttttatctaacaacatgagcaacataaagcag
gtaacattctttatggaagaatgcagacgtatgaaacttgatgtgttaggtccagatgtt
aatgaatctttcagaaaattttctgtaaataaagaaggtgccattcgttttggtatggca
gcaataaaaggtgtgggttcaagtgccgtagagtccattgtagcagagcgaaaagaaaac
ggtcattttaaatcgatcttcgatatggctaaacgtatagatttacgtgctgccaataaa
aaagcttttgaaaatctcgctttagctggtggttttgatagttttcaggacactcacaga
gcacagtattttttagatgaaggtgacggtatcactttcttagaaaaagtaatacgatat
gctgcaaagtaccaggaaaacaaaaactcctctcaagtaagtttatttggtgaagctagt
gaagtacaaattccagaacctgtagtgcctccttgtgaagaatggggaactatggaaaaa
ttaaggaaagagcgtgatgtggtaggtatgtatatttctgggcatccgttagatgattat
aatatagaaatgaagtctttctgtaacgctaacctcaattaccttgaagatttacaacag
gtgctaaatgcagagctatcattagcttgtattcttacagatattaggcaccttaccaca
aaaaccaataaaggttgggcaatttttactgcagaagattaccataacacttatgagttt
aaaatttatggcgaagattacctaaagtacagacacttgctaatccctaattcatttctg
tatgtaaaagcatttataagagaaggttttacaaataggcaaactggcaaaaagagtgat
ccgagaatacagtttaataattttgaaatgcttcaggatgtgttagagcgctatgcaaga
aaactaaccattcaaataaatgtaaatgaattaaagggcgatgacatacagagtttaaaa
tctatattagatgagcacaaaggcgacaagctactcaactttgttgtttatgaaatggaa
gacaaagtgaagctacacatgcctagcagaaagcataagattaatataaataaagactta
ttatcaacgcttcaaaacaaagcggtacactataaattaaattaa

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