KEGG   Croceibacter atlanticus: CA2559_05850
Entry
CA2559_05850      CDS       T01256                                 
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
cat  Croceibacter atlanticus
Pathway
cat03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CA2559_05850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cat03021]
    CA2559_05850
   03400 DNA repair and recombination proteins [BR:cat03400]
    CA2559_05850
Enzymes [BR:cat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CA2559_05850
Transcription machinery [BR:cat03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CA2559_05850
DNA repair and recombination proteins [BR:cat03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CA2559_05850
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 Fungal_KA1
Other DBs
NCBI-ProteinID: EAP88259
UniProt: A3U7P2
Position
1311508..1312461
AA seq 317 aa
MIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAISSVRVEGVDHEFSTISGVV
EDVTEIILNLKQVRFKRQIDEVDNETVTMNISGQEQLTAGDFQKFISGFQVLNPDMVICN
MDKKVNLNIEITIEKGRGYVPAEENKKSNAPIGTIFTDSIFTPIKNVKYSIENYRVEQKT
DYEKLVFEIQTDGSIHPKDALTEAAKTLIHHFMLFSDERITLEADEIAQTETYDEESLHM
RQLLKTKLVDMDLSVRALNCLKAAEVDSLGDLVSYNKNDLMKFRNFGKKSLTELEELVNN
KGLNFGMDLSKYKLDKD
NT seq 954 nt   +upstreamnt  +downstreamnt
atgattgattcaaccgatttcgaaggtaaattcgaatttcgtccgttggagcctggttat
ggtttaacagtaggtaatgcactaagacgtgtattattatcttctttagaaggtttcgca
atttcttctgtacgtgttgaaggtgtagatcatgaattttctacaatttcaggtgttgtt
gaagatgtaactgaaatcatattaaatttaaaacaagtacgttttaaaagacaaattgac
gaagtagacaatgaaactgtaactatgaatatttctggtcaagagcagttaactgctggt
gattttcagaaattcatttcaggattccaagtattgaatccagatatggtaatttgtaat
atggacaaaaaagtgaaccttaatatagaaattactatagaaaaaggacgcggatatgta
ccagcagaagaaaacaagaaaagtaacgcaccaataggtacaattttcacagattctatc
tttacacctataaaaaatgtaaagtatagtattgaaaactaccgtgttgagcaaaagaca
gattacgaaaagttagtttttgaaatccaaacagatggttcaatccatcctaaagatgct
ttaactgaagctgctaagactttaatacatcactttatgttatttagtgatgagcgcatc
accttagaggcagatgagattgctcaaactgaaacttatgatgaagagtctttacatatg
cgtcagttattaaagactaagttagtagatatggatctttctgtacgtgcacttaattgc
cttaaagctgcagaagtagattcattaggagacttagtttcttataataagaacgattta
atgaagtttagaaacttcggtaaaaagtctttaacagaattagaagaacttgtaaacaac
aagggacttaattttggaatggatctttcaaaatataaattagataaagattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (72)   

Download RDF
DBGET integrated database retrieval system