KEGG   Carnobacterium inhibens: Q783_03240Help
Entry
Q783_03240        CDS       T02884                                 

Definition
(GenBank) 5-hydroxymethyluracil DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
caw  Carnobacterium inhibens
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:caw00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Q783_03240
Enzymes [BR:caw01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Q783_03240
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Q783_03240
DNA repair and recombination proteins [BR:caw03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Q783_03240
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
671162..672001
Genome map
AA seq 279 aa AA seqDB search
MPELPEVETVRKGLEQLVLGATIQSVDVYWDRIVAGSIDSEEFKQLLVGETIIEFDRRGK
YIIFRFEHWALVSHLRMEGKYEVENSTAPLKKHTHIVFHLTDGRDLRYLDVRKFGRMTLV
PLGKEFSTTGIRLLGPEPTKEAFDGKTFYTTLQTKKRSIKPLLLDQTIVAGLGNIYVDEA
LFVAKIHPMRAANSLSKNEVSRLHESIIKVLGDAVKAGGTTIRTYKNALGDAGTFQVKLA
VYGKKGSPCIRCGTPIEKIKVAQRGTHFCPNCQQLDSDY
NT seq 840 nt NT seq  +upstreamnt  +downstreamnt
ttgcctgaattaccagaagttgaaacggttagaaaaggtttagaacaacttgtattaggc
gcaacgattcaatcagtagatgtttattgggaccgtatcgttgctggatctatcgatagc
gaagaatttaaacagcttttagttggagaaacgatcatagagtttgatagacgaggaaaa
tacattattttccgttttgaacattgggctttggtttctcatttgcgtatggaaggtaag
tatgaggtagaaaattcaacagcacctttaaaaaaacatacacatatcgtttttcattta
acagacggaagagatttacgttatctggatgtacggaaatttggtcggatgacacttgtt
cctttaggaaaagagtttagtacgacaggtataaggctacttggtcctgaaccgactaaa
gaagcttttgatggaaagacattttatactacactacaaactaaaaaacggtctattaag
cctctgttattggatcaaacaattgtagctggattaggaaatatttatgtagatgaagct
ttatttgtagctaagatccatccgatgagagctgcaaatagcttaagtaaaaatgaagtt
tcaaggttgcatgaatccattatcaaagtcttaggggatgctgtaaaagctggtggaacg
acgattcgcacttataaaaatgcacttggagatgctgggacatttcaagtgaaattagcg
gtttatggtaaaaaaggaagtccgtgtattcgatgtggaacgcctatagaaaaaataaaa
gtagctcaacgaggaactcatttttgtcctaattgccagcaattagacagtgattactaa

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