KEGG   Berryella intestinalis: JI75_07025
Entry
JI75_07025        CDS       T03545                                 
Name
(GenBank) DNA polymerase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
cbac  Berryella intestinalis
Pathway
cbac03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cbac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    JI75_07025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbac03400]
    JI75_07025
Enzymes [BR:cbac01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     JI75_07025
DNA repair and recombination proteins [BR:cbac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     JI75_07025
SSDB
Motif
Pfam: UDG Uma2
Other DBs
NCBI-ProteinID: AJC12451
UniProt: A0A0A8B4M9
Position
complement(1560916..1561521)
AA seq 201 aa
MADSRTLDDVRADVAACRRCPLCDGRTNTVFGNGDPHARVLVVGEAPGKNEDKQGEPFVG
AAGRNLSEFLEIAGLKREEIFIANVLKCRPPDNRDPRPDEICACAPFLREQTRLIDPEVI
VTLGNFATKFILKTERGITSLHGQTFMAGRFKVFPMFHPAAAIYDRTKRPLIEEDFARLG
EVLRAGGASASAEGAAPVDAR
NT seq 606 nt   +upstreamnt  +downstreamnt
atggcggattcccgtactttggatgatgtgagggccgatgtcgcggcctgtcgccgctgc
cctctgtgcgacgggcggaccaacaccgtgttcggcaacggagacccgcatgcgcgcgtc
ttggtggtcggtgaagccccgggtaagaacgaggacaagcagggcgagccgttcgtgggc
gccgcagggcgcaacctgtccgagttcctggagattgcggggctcaagcgcgaggagata
ttcattgccaacgtgctgaagtgccgcccgcccgacaaccgcgacccgcgccccgacgag
atctgcgcctgcgccccgttcctgcgcgaacagacgcgcctgatcgaccccgaggtgatc
gtgactctgggcaatttcgccaccaagttcatcctgaaaaccgagcgcggcatcaccagc
ctgcacgggcagacgttcatggcgggcaggttcaaggtgtttcccatgttccatcccgca
gcggcgatctacgatcgcaccaagcgccccctgatcgaggaggatttcgcgcgccttggc
gaggttctgcgcgcgggcggtgcgagcgcgtcggcagagggcgcggcgcccgtggacgcc
cgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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