KEGG T00788: CbuK

Coxiella burnetii CbuK_Q154: CbuK_0042

Entry

CbuK_0042 CDS T00788

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

cbc Coxiella burnetii CbuK_Q154

Pathway

cbc03410	Base excision repair
cbc03420	Nucleotide excision repair
cbc03430	Mismatch repair
cbc03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:cbc03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:cbc03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:cbc03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:cbc03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S mRNA_cap_enzyme

Other DBs

NCBI-GI:

212217727

NCBI-GeneID:

7014556

UniProt:

B6J952

Position

39025..41472

AA seq 815 aa
MILLSLKHYRQKRDFTKTSEPQGESASSSQQFIYVIQKHDASHLHYDLRLELDGVLKSWA
VPKGPSLNSDLKRLAVEVEDHPIDYATFEGNIPKGQYGAGPVIVWDKGTWQPEGNAKENL
KKGKLVFIINGEKLKGKWALVRLKTDDSKNNWLLIKKKDHYATERFDIDNYPLSVISGAS
IEEIKNHKLDLSLSDLKNAKKTVVPEFIQPQLAKLKTVVPDSPDWIHEIKFDGYRIICII
KKGIIQLMTRNQKNWTEKLAGLAETMKSIPIDESILDGEIVVFDESGKTDFQLLQNAIKA
KKYNEIKYYLFDIPFCQKFDLSQVPLIMRKRLLKKLILQWKEKSGSILYSSHIKGNGKAI
LERACELGLEGIISKKIDAAYEQRRSSSWIKLKCKRQQEFVIGGYTKPRGEQLYFGALLL
GYYQNKKLIYCGRVGTGFSSLSLKDIYEKLINREQKAPAFSELPPFGIKAGNHWVKPELV
AEIEFAEWTKDKRLRQPVFKGLREDKEAKGVKLETVKKTTVKNKSNNIKLTNPEKILYPE
EKITKRQLADFYSKIADRLLPHIVHRPLMLLRCPNGYNKECFFQKHPDQNGEEFVYSVEI
EEKERKRYLTIHDEKGLLALVQMGVLEIHPWGSSDSHPEKPDRLIFDIDPHPAVSWKAVI
NCATDVFEVLKALGLRSFVKTSGGKGLHVYVPIQPQLGWEKLHEFAQKLAKLIVQVNPRL
YTAELSKGKRLNKIFIDYIRNNRGATCVAPYSTRAKKHVPLSTPVSWDELSAVKSPTQFT
IKNIFHRLEALNQDPWEEFFDIKQSITASMWKFFS

NT seq 2448 nt +upstreamnt +downstreamnt
gtgattctgttgagcctgaaacattatcgccaaaaacgagattttaccaaaacctccgaa
cctcagggggaaagtgcttcctctagtcaacagttcatttacgtgattcaaaaacacgat
gcttcacatttgcattacgaccttcgcttagaattagacggtgtactgaaaagctgggcg
gtccctaaagggccttccttaaattctgatctaaaacgattagctgtcgaagtggaggac
catcccatcgattacgccacttttgaaggtaatatccctaaaggacaatatggtgcgggt
ccggttattgtttgggataaaggtacctggcagcccgaagggaatgcaaaagagaattta
aaaaaaggaaagctcgtctttattattaatggtgaaaaattaaagggaaaatgggcgcta
gtaaggcttaaaaccgacgattctaagaataattggctattaattaaaaaaaaagatcat
tatgccaccgaacgttttgatatcgataattatccattaagcgtaatcagtggcgcttcc
atagaagaaattaaaaatcacaaacttgacctatcgctaagcgacttaaaaaatgcaaaa
aaaacagtagttcctgaatttatccaaccgcaactcgctaaattaaagacagttgtgccc
gattcaccggattggattcacgagattaaatttgatggctatcgaatcatttgtattatt
aaaaaaggaattattcaattaatgacacgaaatcaaaaaaactggactgaaaaattagcc
gggcttgcagaaacgatgaaatcaatacctatcgatgagtcaatactggatggagaaata
gttgttttcgatgaatcggggaaaacagatttccagcttctgcaaaatgccatcaaagcc
aagaaatacaatgaaataaaatattatctctttgatattcctttttgccagaaatttgat
cttagccaagtgccattgataatgagaaaacgattattaaaaaagttaattttacaatgg
aaagaaaaaagtggaagcatactttattccagtcatataaaaggaaatggaaaagctatt
ctagaacgtgcttgcgagttgggtttggaaggaattatttccaaaaaaatcgatgctgct
tatgagcaacgaagaagctctagttggataaagctcaagtgtaaacgacagcaagaattc
gtgattggtggctatacaaaaccgcggggagaacaactctattttggcgctttattatta
ggctattatcaaaataaaaaattaatttattgtgggagggttggcactgggtttagcagt
ctatcgttaaaagatatttatgaaaaattaataaatcgcgaacaaaaagcccccgccttt
tctgagttacctccttttggaataaaagcaggcaatcattgggtaaaacccgaattagtg
gctgagattgaattcgctgagtggacgaaagataaacgtttgaggcagccggtttttaaa
gggttgcgtgaagacaaggaagctaaaggagttaaattagaaacagttaaaaaaacgaca
gtcaaaaataagtctaataatattaaattaaccaaccctgaaaaaattctataccccgaa
gaaaaaatcacgaaacgccagttggcggatttttatagcaaaatagccgatcgcttactg
cctcacatcgttcaccgcccgttgatgctgcttcgttgtccgaatggctataacaaagaa
tgtttttttcaaaaacatcctgatcaaaatggcgaggaatttgtttatagcgttgaaata
gaagaaaaagagagaaaaaggtatctgacgattcatgatgaaaaaggccttcttgcatta
gttcaaatgggcgtcttggaaattcacccgtggggcagcagcgattcgcatccggaaaaa
ccagaccgattaatttttgatattgatccgcatccggcggtcagttggaaagccgtgatt
aattgcgcgactgatgtttttgaagtattgaaggctttgggtttgcgaagttttgttaag
acttctggaggaaaagggttgcacgtgtacgttcctattcagccgcaattgggttgggag
aaactgcatgaattcgcgcagaagttggctaaattaattgttcaggttaatccacgtctt
tatacagctgaattgagtaaaggaaaacggctcaataaaatatttatcgattatattcga
aataaccgaggcgccacttgtgtggcgccttatagcacccgagcaaaaaagcatgtccct
ctttccaccccggtttcctgggatgaattgtcagcggtaaaatcccctacccaatttacg
ataaaaaatatattccatcgcctggaggcattaaaccaagacccttgggaggagtttttc
gacataaaacaatcaatcactgcctcgatgtggaaattttttagttaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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