KEGG   Clostridium beijerinckii NCIMB 14988: LF65_02952
Entry
LF65_02952        CDS       T04773                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
cbei  Clostridium beijerinckii NCIMB 14988
Pathway
cbei03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    LF65_02952
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbei03400]
    LF65_02952
DNA repair and recombination proteins [BR:cbei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     LF65_02952
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_27 AAA_14 AAA_29 AAA_22 DASH_Ask1
Other DBs
NCBI-ProteinID: AJG99522
UniProt: A0A0B5QNB9
Position
3247661..3250450
AA seq 929 aa
MALTPMMVEYMKTKEEYSDCILFYRLGDFYEMFFDDAITVSRELELVLTGKNCGLEERAP
MCGIPHHAAAAYIPRLVNKGYKVAICEQLEDPKEAKGIVKRGVVKIITPGTFIDANSSLE
NDNTYLMTIYESDEKIGLAVSDISTGEFKTTSFDNIKITLLDEISKVAPKEILVDKNISQ
SLIDDIKGITTALITEKDFNEFIVSKEEIIDQFSDLEVSGLVNEREISSRVLLKYIYETQ
KMSLTNINLLEQYEIINYMTVDGNSRRNLELTESIREKSKKGSLLWVLDKSATSMGGRTI
RKWIEEPLIIKSEIEKRLSGVSEAFSSISFNEDLRSSLKDIYDIERIVGKISNKNVNAKD
MLSLKASLDKLPSIKELLGTANSELLKEYYEDLDELSDIRELLESSIKEEPSLSIKEGNI
IKDGYNSEVDELRQSKLHGKEWIAALENREREFTGIKSLKVGYNKVFGYYIEISKSNYNS
IPEGRYVRKQTLANAERYITEELKIMEDKILGAEEKLINLEYSLFTDIRDSIEKEIARLK
KSARIISNLDGISTLSLIALENDYVKPEINEDGIIEIVDGRHPVVEKVIGRGEFVSNNTT
LNQSDKELLLITGPNMAGKSTYMRQVALITLMAQIGSFVPASSANISICDKIFTRIGASD
DLAGGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEYITGNENL
RCKTLFATHYHELVKLEGILPGVKNYSVAVKKMKDSVIFLRKIVEGGADESYGIEVAKLA
GLPDDVINRAKEILLGLEGENNFDIHKVTNTEIIENEVAVDINGGNSVVTITEKASESKS
QYIEKVEAKDSFDKAESNKANDRIDEKTENSSKKHKNKDSSNNMQLDFTFIEKEAFLKEV
SEVDILSLNPMEAMNTLYRLVAEAKKLNN
NT seq 2790 nt   +upstreamnt  +downstreamnt
atggctttaacgccaatgatggttgaatatatgaaaacaaaggaggaatacagtgattgt
attctattttatagattaggtgatttttacgaaatgttttttgatgatgcaataactgta
tctcgagaacttgagttagttcttacaggcaaaaattgtggtcttgaggaaagagctcct
atgtgtggaataccacatcatgcagcggcagcatatataccaaggcttgttaataagggg
tataaggtagcaatatgtgaacagcttgaagatccaaaggaagcaaaaggaattgtaaaa
agaggtgttgtaaaaataattacaccaggaacattcatagatgctaatagttctctagaa
aatgataatacatatttaatgactatatatgaaagcgatgaaaaaataggtttagcagtt
tcggatataagtactggagaatttaaaacaacttcctttgataatataaagataacctta
ttagacgagatttcaaaggttgcacctaaagaaattttagtagataaaaacattagccaa
tctttaatagatgatataaagggtataactactgcacttattacagagaaagactttaat
gaatttatcgtatcaaaagaagaaattatagatcaattttcggatttagaggtttctgga
ttagtaaatgaaagagaaatttcaagtagagtattacttaaatacatatatgaaactcaa
aaaatgagtttaactaatataaatttgctagaacaatatgaaataattaattacatgaca
gtcgacggaaattcaagaagaaatttagaacttactgaaagtataagagaaaaaagcaaa
aaagggtctcttttatgggttcttgataagagtgctacatctatgggtggtagaacaatt
agaaaatggattgaagaaccgttaattattaaatctgaaatagaaaaaagactaagtggt
gttagcgaagcatttagttcaattagttttaatgaggatttaagaagttctttaaaagat
atttatgatatagaaagaattgtcggtaaaatttcaaataaaaatgtgaatgcaaaagat
atgttatctcttaaagcttcattagacaaattaccatctataaaagaacttttaggaact
gctaattcagaactgctaaaggaatattatgaagatttagatgagctatcagacataaga
gaattacttgaatcttccattaaagaagagccctctttaagtataaaagaaggaaatata
attaaagatggttataattcagaagttgatgaattaagacagtcaaagcttcatggtaag
gaatggattgcagctctggaaaatcgtgaaagagaatttaccggaatcaaatctttaaag
gtaggctataacaaagtatttggatattacatagaaatttcaaaatcaaattataattct
attccagaaggtaggtatgtaagaaagcaaactcttgcaaacgctgagagatatataaca
gaagaacttaaaattatggaagataaaattctaggtgcagaagagaagcttataaactta
gaatattctttattcactgatataagagattccattgagaaggaaattgcaagactaaaa
aaaagtgctagaataatttctaatctagatggtatttccaccttgtcattaatcgctctt
gaaaatgattatgtaaaacctgaaatcaacgaggatggaattattgaaatagtagatggc
aggcacccagttgttgaaaaggtaattggaagaggtgaatttgtttccaacaacactacc
ttgaatcaaagtgataaggaattgctattaataactggacctaacatggcaggtaaatca
acatacatgagacaggttgcccttattacgttaatggcccaaataggatctttcgtacca
gcatctagtgctaatatttcaatttgtgataagatattcactagaattggagcttctgat
gatttagctggtggtaaatccacatttatggttgaaatgtgggaagtatcaaatatactt
aagaatgcaacttctaaaagtctagtattattagatgaagtagggcgtggaacatcaact
tatgatggactttcgatagcttggtctgtcattgaatacataactggtaacgaaaattta
agatgtaaaactttatttgcaacacactatcatgagttagtaaaacttgaagggatttta
cctggtgtcaagaattattctgtagctgttaagaaaatgaaagatagcgtaatcttctta
agaaagatagtcgaaggtggtgcggatgagtcttacggtatagaagttgctaaacttgcc
ggacttcctgatgatgtcattaatagagcaaaagaaattcttctaggccttgaaggcgaa
aataattttgatatacacaaagtaacaaacactgaaatcatagaaaatgaggttgctgta
gatataaatggaggcaacagtgtagttactattactgaaaaagcctctgaaagtaagagt
caatatatagaaaaagttgaagcaaaagattcttttgataaagcagaaagtaataaagct
aatgatagaattgatgaaaagactgaaaattcatctaaaaaacataaaaataaggattct
tctaacaatatgcaattagattttacttttatagaaaaagaggcatttctaaaagaagtt
agcgaagtggatatattaagtttaaatcctatggaagccatgaacactctatataggtta
gttgctgaagctaaaaaattaaacaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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