KEGG   Clostridium botulinum F Langeland: CLI_3727
Entry
CLI_3727          CDS       T00563                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
cbf  Clostridium botulinum F Langeland
Pathway
cbf00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cbf00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CLI_3727 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cbf01007]
    CLI_3727 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbf03016]
    CLI_3727 (lysS)
Enzymes [BR:cbf01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     CLI_3727 (lysS)
Amino acid related enzymes [BR:cbf01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   CLI_3727 (lysS)
Transfer RNA biogenesis [BR:cbf03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    CLI_3727 (lysS)
 Prokaryotic type
   Other AARSs
    CLI_3727 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: ABS41573
UniProt: A7GJB3
Position
complement(3863520..3865034)
AA seq 504 aa
MSKEDNVINSFEEQANELMKERFQKLKELQSNGKDPFDVYKVERTHTSKEVKDNYEDLEG
KTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTFDIGDIISVTG
TVFKTKTGETSIHITDFQLVCKSLRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIK
RTAIIKSMREFLDNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKR
LIVGGFEKVYEIGKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVL
GTTKVEYEGAEIDFTPPWRRLTMVDAVKEYAGVDFNIIKNDIEARTIAKEKHIEFKKELK
DCTKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVC
NAYSELNDSIVQKERFMQQLKERELGDDEAYMMDDDFITSLEVGMPPTGGLGIGIDRLIM
FLTDTHSIRDVILFPTMKPQPNNQ
NT seq 1515 nt   +upstreamnt  +downstreamnt
gtgtcaaaggaagataatgtgataaacagttttgaagaacaagcaaatgaattaatgaag
gaaagattccaaaagttaaaggaacttcaatctaatggcaaagatccatttgatgtttat
aaggttgaaagaacccatacttcaaaagaagtaaaggataattatgaagatctagaagga
aaaactgttacagtggcaggaagacttatgtcaaaaagagttcatggaaaagctggattt
tcagatatacatgatagatatggaaaaattcaattatacataaagataaatgatgtaggg
gaagaaaaacttaaagaatataagacttttgatataggtgatataataagtgtaacagga
acagtttttaaaacaaaaacaggagaaacatcaatacacataacagattttcaattagtt
tgtaaatctttaagaccattaccagaaaagtggcatggattaaaagatccagatttaaga
tatagacaaagatatgtagatttaataataaaccaagatgttagagatacttttataaaa
agaacagctataattaagtctatgagagaattcttggataatagaggatttttagaagta
gaaacaccaatattatcaccaatagcaggcggagcagcagctaagccttttattactcat
cataatgctttagatatagatatgtatcttagaatagctactgaattatatctaaaaaga
ttaatagtaggtggctttgaaaaagtatatgagattggtaaaaactttagaaatgaagga
atagatataagacataatccagaatttacagctatagaattatatgaagcttatgcggat
tataatgatatgatggaaatcacagaaaatatgatagcttatatatgcgaaaaagttcta
ggtacaactaaagttgaatatgaaggagcagaaatagattttacaccaccatggagaaga
ttaactatggtagatgctgtaaaggaatatgcaggagtagattttaacattataaaaaat
gacatcgaggcaagaacaatcgcaaaagaaaaacatatagaatttaaaaaagaattaaag
gattgcacaaaaggtgatgtacttataggattatttgaggaattctgtgaagacaagtta
atgcagcctacttttatttgtgattatccagtagaaaattcacctcttacaaagaagaaa
agaggaaatgaagcatttactgaaagatttgaaggctttgtatttggaagagaagtatgt
aacgcatattctgaattaaatgattctatagttcaaaaagaaagattcatgcaacaatta
aaggaaagagaattaggtgatgatgaagcttatatgatggatgacgactttataacttca
ttagaagtaggtatgccaccgacaggaggattaggaataggtattgatagattaataatg
ttcttaacagatacacattctataagagatgttatactattcccaactatgaaaccgcaa
cctaataatcaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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