KEGG   Coxiella burnetii CbuG_Q212: CbuG_0044
Entry
CbuG_0044         CDS       T00787                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
cbg  Coxiella burnetii CbuG_Q212
Pathway
cbg03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cbg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CbuG_0044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbg03400]
    CbuG_0044
Enzymes [BR:cbg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CbuG_0044
DNA repair and recombination proteins [BR:cbg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CbuG_0044
SSDB
Motif
Pfam: LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S
Other DBs
NCBI-ProteinID: ACJ17503
Position
39044..41491
AA seq 815 aa
MILLSLKHYRQKRDFTKTSEPQGESASSSQQFIYVIQKHDASHLHYDLRLELDGVLKSWA
VPKGPSLNSDLKRLAVEVEDHPIDYATFEGNIPKGQYGAGPVIVWDKGTWQPEGNAKENL
KKGKLVFIINGEKLKGKWALVRLKTDDSKNNWLLIKKKDHYATERFDIDNYPLSVISGAS
IEEIKNHKLALSLSDLKNAKKTVVPEFIQPQLAKLKTVVPDSPDWIHEIKFDGYRIICII
KKGIIQLMTRNQKNWTEKLAGLAETMKSIPIDESILDGEIVVFDESGKTDFQLLQNAIKA
KKYNEIKYYLFDIPFCQKFDLSQVPLIMRKRLLKKLILQWKEKSGSILYSSHIKGNGKAI
LERACELGLEGIISKKIDAAYEQRRSSSWIKLKCKRQQEFVIGGYTKPRGEQLYFGALLL
GYYQNKKLIYCGRVGTGFSSLSLKDIYEKLINREQKAPAFSELPPFGIKAGNHWVKPELV
AEIEFAEWTKDKRLRQPVFKGLREDKEAKGVKLETVKKTTVKNKSNNIKLTNPEKILYPE
EKITKRQLADFYSKIADRLLPHIVHRPLMLLRCPNGYNKECFFQKHPDQNGEEFVYSVEI
EEKERKRYLTIHDEKGLLALVQMGVLEIHPWGSSDSHPEKPDRLIFDIDPHPAVSWKAVI
NCATDVFEVLKALGLRSFVKTSGGKGLHVYVPIQPQLGWEKLHEFAQKLAKLIVQVNPRL
YTAELSKGKRLNKIFIDYIRNNRGATCVAPYSTRAKKHVPLSTPVSWDELSAVKSPTQFT
IKNIFHRLEALNQDPWEEFFDIKQSITASMWKFFS
NT seq 2448 nt   +upstreamnt  +downstreamnt
gtgattctgttgagcctgaaacattatcgccaaaaacgagattttaccaaaacctccgaa
cctcagggggaaagtgcttcctctagtcaacagttcatttacgtgattcaaaaacacgat
gcttcacatttgcattacgaccttcgcttagaattagacggtgtactgaaaagctgggcg
gttcctaaagggccttccttaaattctgatctaaaacgattagctgtcgaagtggaggac
catcccatcgattacgccacttttgaaggtaatatccctaaaggacaatatggtgcgggt
ccggttattgtttgggataaaggtacctggcagcccgaagggaatgcaaaagagaattta
aaaaaaggaaagctcgtctttattattaatggtgaaaaattaaagggaaaatgggcgcta
gtaaggcttaaaaccgacgattctaagaataattggctattaattaaaaaaaaagatcat
tatgccaccgaacgttttgatatcgataattatccattaagcgtaatcagtggcgcttcc
atagaagaaattaaaaatcacaaacttgccctatcgctaagcgacttaaaaaatgcaaaa
aaaacagtagttcctgaatttatccaaccgcaactcgctaaattaaagacagttgtgccc
gattcaccggattggattcacgagattaaatttgatggctatcgaatcatttgtattatt
aaaaaaggaattattcaattaatgacacgaaatcaaaaaaactggactgaaaaattagcc
gggcttgcagaaacgatgaaatcaatacctatcgatgagtcaatactggatggagaaata
gttgttttcgatgaatcggggaaaacagatttccagcttctgcaaaatgccatcaaagcc
aagaaatacaatgaaataaaatattatctctttgatattcctttttgccagaaatttgat
cttagccaagtgccattgataatgagaaaacgattattaaaaaagttaattttacaatgg
aaagaaaaaagtggaagcatactttattccagtcatataaaaggaaatggaaaagctatt
ctagaacgtgcttgcgagttgggtttggaaggaattatttccaaaaaaatcgatgctgct
tatgagcaacgaagaagctctagttggataaagctcaagtgtaaacgacagcaagaattc
gtgattggtggctatacaaaaccgcggggagaacaactctattttggcgctttattatta
ggctattatcaaaataaaaaattaatttattgtgggagggttggcactgggtttagcagt
ctatcgttaaaagatatttatgaaaaattaataaatcgcgaacaaaaagcccccgctttt
tctgagttacctccttttggaataaaagcaggcaatcattgggtaaaacccgaattagtg
gctgagattgaattcgctgagtggacgaaagataaacgtttgaggcagccggtttttaaa
gggttgcgtgaagacaaggaagctaaaggagttaaattagaaacagttaaaaaaacgaca
gtcaaaaataagtctaataatattaaattaaccaaccctgaaaaaattctataccccgaa
gaaaaaattacgaaacgccagttggcggatttttatagcaaaatagccgatcgcttactg
cctcacatcgttcaccgcccgttgatgctgcttcgttgtccgaatggctataacaaagaa
tgtttttttcaaaaacatcctgatcaaaatggcgaggaatttgtttatagcgttgaaata
gaagaaaaagagagaaaaaggtatctgacgattcatgatgaaaaaggccttcttgcatta
gttcaaatgggcgtcttggaaattcacccgtggggcagcagcgattcgcatccggaaaaa
ccagaccgattaatttttgatattgatccgcatccggcggtcagttggaaagccgtgatt
aattgcgcgactgatgtttttgaagtattgaaggctttgggtttgcgaagttttgttaag
acttctggaggaaaagggttgcacgtgtacgttcctattcagccgcaattgggttgggag
aaactgcatgaattcgcgcagaagttggctaaattaattgttcaggttaatccacgtctt
tatacagctgaattgagtaaaggaaaacggctcaataaaatatttatcgattatattcga
aataaccgaggcgccacttgtgtggcgccttatagcacccgagcaaaaaagcatgtccct
ctttccaccccggtttcctgggatgaattgtcagcggtaaaatcccctacccaatttacg
ataaaaaatatattccatcgcctggaggcattaaaccaagacccttgggaggagtttttc
gacataaaacaatcaatcactgcctcgatgtggaaattttttagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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