KEGG T00575: CLC

Clostridium botulinum A Hall: CLC_3214

Entry

CLC_3214 CDS T00575

Gene name

pcrA

Definition

ATP-dependent DNA helicase PcrA (EC:3.6.1.-)

Orthology

K03657

DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]

Organism

cbh Clostridium botulinum A Hall

Pathway

cbh03420	Nucleotide excision repair
cbh03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:cbh03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:cbh03430]

SSDB

Motif

Pfam:

UvrD_C UvrD-helicase UvrD_C_2 AAA_19 Viral_helicase1 AAA_11 AAA_30 DEAD NUDIX

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-Pathema:

UniProt:

Position

complement(3349593..3351809)

AA seq 738 aa
MDLKNKLNKEQYEAAITIDGPLLILAGAGSGKTRVLTYRIAHMIENLNIYPSKILAITFT
NKAAGEMKERIKALVGDVVEGMWVSTFHSSCVRILRREIDKLGYDKNFTIYDTYDQKTLV
KQCMEELNINDKEITDREIINTIGNQKDNLISPKEFKKISNGNYRKDRIADAYILYQKKL
KTNNALDFDDLIYKTVELFKTNKDVLEFYQRKFKYIMVDEYQDTNKSQYELVKLLALVHR
NMCVVGDDDQCIYEWRGADISNILNFEKDYKEAKVIKLEQNYRSKGNILNAANEVIKNNS
QRKNKVLRTENENGNKIKVFRAYSDIDEAKFVASEIKKIIKDSERSFNDFAVLYRTNAQS
RIFEDVFMKRDIPYRLIGGLKFYDRKEIKDLMAYLKLINNPLDDISLRRIINVPKRSIGD
ATVKKVQEFANEMDECMYSVLLDADQILTLSQRSITSIKKFVSIMNSFIRKKDEISVSAL
IKEILEETGYLKELKNSKNPDDVSRVENLKELVSAAADFERESEDKSLGAFLEKVALVTD
IDNYDENSDSVAMMTVHSAKGLEFPVVFMVGMENGIFPGTQSLSDPKEMEESRRLCYVAI
TRAKEQLYITSAEIRKVFGRTVAYALSDFVSEISKDLKDNVNITGEVATDKVLHKNFGIR
SQKTNSINSYKSPSLNNIPKNNVDSNKLNVGLKVKHKDFGIGTIVSMSKVSDDIKLTIAF
DRRGVKILMLSMAPIEAV

NT seq 2217 nt +upstreamnt +downstreamnt
atggatttaaaaaataaattaaataaagaacaatatgaagctgctattactatagatggg
cctttactaatactcgcaggagcaggttcaggcaagacaagggttttgacttatagaata
gcccacatgatagaaaatttaaatatatatccttctaaaattttggccataacttttaca
aataaggctgctggagaaatgaaagaaagaataaaggctttagtaggggatgtggtagaa
ggaatgtgggtttctacatttcactctagctgtgtaaggattttaagaagagaaatagat
aagttaggttatgataaaaattttactatatatgatacttatgatcaaaaaactttagtt
aagcaatgtatggaagaattgaatataaatgataaagaaatcacagacagagaaataata
aataccataggcaatcaaaaggataatttaatatcacctaaggaatttaaaaaaatttct
aatggaaattatagaaaagatagaattgcagatgcatatattttataccaaaaaaaatta
aagactaataatgcattagattttgatgatttgatatataaaactgtggagttatttaaa
acaaataaagatgtattagaattttaccaaagaaaatttaaatatataatggtggatgaa
tatcaagatactaataaatctcaatatgaattagttaaattattagctttagttcataga
aatatgtgtgtagttggtgatgatgatcaatgtatatatgaatggagaggggcagatata
agcaatatattaaattttgagaaggattataaagaagctaaggttataaaattagagcaa
aattataggtcaaagggtaatatattaaatgctgctaatgaggttataaaaaataattct
caaagaaaaaataaagttttaagaactgaaaatgaaaatggaaacaagataaaagtattt
agagcatattctgatatagatgaagcaaaatttgtagcttccgaaatcaaaaaaataata
aaggatagtgaaagatcttttaatgattttgcagttttatatagaactaacgcccaatcc
cgtatttttgaagatgtgtttatgaaaagagatatcccttatagattaataggtggatta
aagttttatgatagaaaagaaataaaggatttaatggcttatttaaagcttataaacaat
ccattagatgatataagtttaaggagaataataaatgttcctaaaaggagtataggtgat
gctacagtaaaaaaagttcaagaatttgcaaatgaaatggatgaatgtatgtatagcgtg
cttttagatgcggatcaaatattaacattgtctcaaagaagtataacatctatcaaaaag
ttcgtaagtataatgaatagctttataagaaaaaaagatgagataagcgtatctgctctt
ataaaagaaatattagaagaaacaggatacttaaaagaattaaaaaattctaagaatcca
gatgatgtaagtagagtagaaaatctgaaagaattagtttccgcagcagcagattttgaa
agagaatcagaagataaatctttaggagcgtttttagaaaaagtagcattggttacagat
atagataattatgatgaaaattcagatagtgttgctatgatgacagtacatagtgctaag
ggattagaatttcctgtagtatttatggtaggtatggaaaatggaatatttccaggaaca
caatcattgtcagatccaaaagaaatggaagagtctagaagactgtgttatgttgctata
acaagagcaaaagaacagttatatataacttcagcagaaattagaaaagtatttggaaga
accgtagcctatgctttatcagattttgtaagtgagatatccaaagatttaaaagataac
gtaaatattactggagaagtagcaactgataaagtattgcataaaaattttggtataaga
tcacaaaaaacaaatagtattaattcttataaatcacctagcttaaataatatacctaaa
aataatgtggattctaataagcttaatgtaggtttaaaggttaagcataaagattttgga
ataggaactatagttagtatgagtaaggtttcggatgacataaagttaactattgctttt
gaccgtagaggtgttaaaatattaatgcttagtatggcgccaattgaagcggtttag

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-PATHEMA-CBH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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