KEGG   Clostridium botulinum Ba4: CLJ_B1434
Entry
CLJ_B1434         CDS       T00895                                 
Name
(GenBank) helicase, UvrD/REP/exonuclease family protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cbi  Clostridium botulinum Ba4
Pathway
cbi03420  Nucleotide excision repair
cbi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLJ_B1434
   03430 Mismatch repair
    CLJ_B1434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbi03400]
    CLJ_B1434
Enzymes [BR:cbi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CLJ_B1434
DNA repair and recombination proteins [BR:cbi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CLJ_B1434
   MMR (mismatch excision repair)
    Other MMR factors
     CLJ_B1434
SSDB
Motif
Pfam: UvrD_C UvrD-helicase RNase_T AAA_19 UvrD_C_2 Viral_helicase1 Rv2179c-like AAA_12 DEDDh_C AAA_11 DEAD DNApol_Exo AAA_30 Pox_A3L
Other DBs
NCBI-ProteinID: ACQ51647
UniProt: A0A3F2ZQS4
Position
1444617..1447184
AA seq 855 aa
MLDIYLNDKQKKVINTLDKNILLLSSAGTGKTKTLSMRIGNIIAKNLALGEQILCLTFTN
RACKEMKEKIIETVGKEGLKVTVKTFHSFCFDVIKKEAKKNTDISFDFTIYDEEDTKEII
SELNPYKFNVSCLQRFINIVKEKSINYKDRDYKDVIDTMIKYNPNIFNDICKNEKYMVDK
TLVDYLKIYGYLMMISYDKKLYERHGLDFNDLIIKVYDLFQKDKITTYWRKKYKFIHIDE
MQDTSEIEYNIVSKLFKNNNIMISGDYYQTIYEWRGSNPTIIFDKYKKEYNPEFIVFDKN
YRSSEILLKASYEFLLNAFGKGVNEIYKEGIEPKANIKGDLIEFKKAYDFMEEATFIFNK
IKSLKVEKLSRVAILTRNNRINIALSEKFKILNSKLPKEDRVGFLLVDEFKFFRREEIKD
VLAYLKLIVNDFDSNSLKRILKKFGKGIGEKTIEEIEKEENIKIGVRLTDLIHKNTQEYG
DYYELLTRELDNENVVVFDVESTGINTTEDEIVQIAGIKINNKGEAIESFQRFLNPKKSV
GDSYLVHGFSDQFLKENGENKKVVLKDFLKFIKDTVIVGHNVTFDISILNSELERLSLEK
ASFKTYYDTLDIARRFYPSLTNHKLETLSKLFNTETKSSHDAMDDILATKDILMVMLREK
VKPTIINRMVVYGKYIKKFQPIYEEIANLKKLSYIKNPKDIIGEIVNKTKIKEIYKAQYI
KINNLREFFVIAKEIENKEVSSRDNLIELLKITSLSNSELDRMLTKYPRVPIITVHQAKG
AEFDYVFLAALQNNIFPNYMAVKEGNEIEEKRLFYVAMTRAKKYLYLSFSEYEHNRRKAK
SMLIDYIPKDYLKYM
NT seq 2568 nt   +upstreamnt  +downstreamnt
atgttagatatatatcttaatgataaacagaaaaaagtaataaatacattagataaaaat
atactccttttgtcttctgcaggtacagggaaaacaaaaacattaagtatgaggatagga
aatataatagctaaaaacttagctttaggagagcaaatactttgtttaactttcactaac
agagcctgtaaggaaatgaaagaaaaaataatagaaacagtagggaaagaggggttaaaa
gttactgtaaagacgtttcatagcttttgttttgatgtaataaaaaaagaggcaaaaaag
aatacggatatttcctttgattttactatatatgatgaagaagatacaaaggagataata
agtgaattaaatccatataagtttaatgtttcttgtcttcaaagatttataaacattgtt
aaagaaaaaagtataaattataaagatagagattataaagatgttatagataccatgata
aaatataatcccaacatatttaatgatatatgtaaaaatgaaaaatatatggtagataaa
actttggtagattatttaaaaatatatggatatctaatgatgataagttatgataaaaag
ctatatgaaaggcatggattagattttaatgatttaataataaaggtttatgacttattt
caaaaagataaaataactacatattggagaaaaaaatataaatttattcatatagatgaa
atgcaggataccagtgaaatagaatacaatatagtttcaaaactatttaaaaacaataat
ataatgattagcggtgattattaccagaccatatatgaatggagaggatctaatcctacc
ataatatttgataagtataaaaaagaatataatccggaatttatagtttttgataagaac
tatagatcttcagaaatattattaaaggcctcatatgaatttttactaaatgcttttgga
aaaggtgtaaatgaaatatataaagaaggtatagagcctaaagctaatataaaaggggat
ttaatagaatttaagaaagcttatgattttatggaagaggcaacttttatatttaataaa
ataaaatctttaaaggtagaaaagctttcaagagttgctatattaactaggaataataga
ataaatatagctttaagtgaaaagtttaaaatactaaattcaaagcttccaaaagaagat
agagtaggattccttttggtggatgaatttaaattctttagaagagaggaaataaaggat
gtattagcttatttaaaacttatagtaaatgattttgatagtaatagtttaaaaaggata
ttaaagaagtttggaaagggcataggagaaaaaaccatagaagaaatagaaaaagaggaa
aatataaaaataggtgtaagacttacagatttaattcataagaatactcaagaatatgga
gattattatgagcttttaactagagaattagataatgaaaatgtagtagtttttgatgta
gaaagcacagggattaatactacagaggatgaaatagtgcaaattgcaggtattaaaata
aacaataaaggagaagctatagaaagctttcaaagatttttgaatcccaagaagtctgta
ggggactcttatttagttcatggttttagtgaccaatttttaaaagaaaatggagaaaat
aaaaaggtagttttaaaagattttttaaaatttataaaagatacagtaatagttggacat
aatgtaacctttgatatatccatattaaatagtgaacttgaaagattaagtttagaaaaa
gcaagttttaaaacctattatgatactttagatatagctagaagattttatcctagttta
acaaatcataaattagaaactttaagtaagttatttaatacagaaacgaaatctagccat
gatgctatggatgatatattggctacaaaagatattcttatggttatgctaagggaaaaa
gttaaacctactataataaatagaatggtagtgtacggaaaatatattaaaaaatttcaa
cctatatatgaagaaatagctaatttaaaaaaattaagttatataaaaaatccaaaggac
ataataggagaaatagttaataaaacgaaaataaaggaaatatacaaagcccaatatatt
aagataaacaatttgagggaattttttgttatagctaaagaaatagaaaataaagaagta
tcatcaagagacaatttaatagaacttttaaaaataacttctttgtctaatagcgaatta
gatagaatgcttacaaaatatccaagagtaccaataataacagtgcatcaagcaaagggg
gcggaatttgattatgtatttttagctgcacttcaaaataatatatttccaaattatatg
gcagtaaaagaaggaaatgaaatagaagagaaaagactattttatgttgctatgactaga
gcaaaaaaatatttatatctaagcttttcagaatatgagcataacagaagaaaagctaaa
agtatgcttatagattatatacctaaagattatttaaagtatatgtaa

DBGET integrated database retrieval system