KEGG   Clostridium botulinum H04402 065: H04402_02450
Entry
H04402_02450      CDS       T02076                                 
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
cbj  Clostridium botulinum H04402 065
Pathway
cbj03030  DNA replication
cbj03430  Mismatch repair
cbj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cbj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H04402_02450
   03430 Mismatch repair
    H04402_02450
   03440 Homologous recombination
    H04402_02450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbj03032]
    H04402_02450
   03400 DNA repair and recombination proteins [BR:cbj03400]
    H04402_02450
Enzymes [BR:cbj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     H04402_02450
DNA replication proteins [BR:cbj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     H04402_02450
DNA repair and recombination proteins [BR:cbj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     H04402_02450
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NII HHH_6 Rv2179c-like tRNA_anti-codon RNase_H_2 DEDDh_C HHH_3
Other DBs
NCBI-ProteinID: CBZ04258
Position
complement(2567204..2571502)
AA seq 1432 aa
MENTSVGDLQKEINKERFDTDKEIKIVRVQYFRKKNKLRIILKSIGNFTKEKEDHIKNIL
KKRFSMVEDFEIICYKDLSNITLEELSKKYWVDIVNLASSSVPIARDCLLKSKREVLEDS
INITYNNEFLCRFLSKNKFEGKLKSYIRDIFGIKCNIKLEYDKSFNEEDYFKTIETMEKS
MIKNVLSEIKSKEKKVIRKENSPKTREEENKDTSVILGRSIKEDSIFMKDLNENSGIVVV
CGDVFKKEVIETKTGRKIVTFFITDYTNSMTVKLFPRPRDADRIIEEIKEGIYCKVRGEV
VNDPYARECVIMAKDIVKTTKIEKMDIAEEKRVELHMHSQMSAMDGMTPVSELVKRAAKW
GHKAVAITDHGVVQAYPDAMSAAKKGNIKVIYGIEAYLVDDGVPIVSKAGDKTIEDTFVV
FDLETTGFSSKNDKIIEIGAVKIEKGKIVDRFSEFVNPERSIPDKITELTSITDDMVDDK
EAIDKILPRFIEFIGNSVVVAHNAAFDVSFINKNCKDLKIEFKNSVMDTVTLSRFLFPEL
KRYKLNVIAKHLGISLENHHRAVDDAKATADILLKAFEMLKEKEIITLHNLNKEFLGNIN
IKKEPTYHLIILAKNAVGLKNLYKLVSKSNLEYFFKRPRMAKSLINEYKEGLIIGSACEA
GQIYKEILKGKTKEELKNMIDFYDYLEIQPLGNNEFLVKNGSVKDEKELQEINKKICELG
EFYNKPVVATCDVHFLDEEHEVFRRILMSGQGFSDADNQPPLYFRTTEEMLKEFEYLGEE
KAKEVVIYNTNKIADMIDEIKPIPEETFPPKIEGAEEDIRRMTIEKAHSIYGDPLPEIVE
KRLTKELNSIINNGYAVLYLIAHKLVAKSYEDGYLVGSRGSVGSSFAATMSDITEVNGLP
PHYVCPKCKYSEFFTDGSVGSGADLEDKDCPNCGTKLIKDGHDIPFETFLGFEGDKEPDI
DLNFSGEYQGVVHKYTEVLFGKGHVFKAGTIGTIAEKTAYGFVKKYLDEKNIKANNAEIE
RLSKGCTGVKRTSGQHPGGIMVVPADNEIFNFTPIQHPADDTESDVITTHFDYHSISGRL
LKLDILGHDDPTVLRMLQDLTQVDPKSVPLGDPKVISLFTSPEALGVTEEDIDCPVGTYG
LPEFGTKFVRQMLLDTKPKSFAELVRISGLSHGTDVWLNNAQYFIKEGYTTIKDCISTRD
DIMVYLLQKELPPKSAFTIMEKVRKGKGLTEEQEALMKEHDVPDWYIESCKKIKYMFPKG
HAVAYVMMAMRIAYFKVYYPRAYYATYFSVRADDFDADLIVKGEEKIKEKMNELYAMGNN
ITQKDKGLLTILEICYEMYKRGIKFLKVDLYKSNATKFLIEGDSIRPPLSALQGVGKNAA
KSIEEARLEGEFISKEDLRLRTKVTKTVIETLENHGCLRGMQETNQISLFSL
NT seq 4299 nt   +upstreamnt  +downstreamnt
atggaaaatacttcagttggtgatttgcaaaaggaaataaataaagaaaggtttgataca
gataaagaaataaaaatagtaagagttcagtattttagaaaaaaaaataaactaagaata
atactaaaatccattggtaattttactaaagaaaaagaagaccatataaaaaatatatta
aagaagagattttctatggtggaggattttgaaataatctgctataaagatctatccaat
attaccctagaggaactttcaaaaaaatattgggtagatatagtgaatttagcttcttct
tctgtacctattgcaagggattgtcttttaaaatctaaaagagaagtgctagaagatagt
ataaatataacctataacaatgaatttttatgtaggtttctttcaaaaaataaatttgaa
ggcaaactgaaatcctatataagagatatatttggaataaaatgcaatataaaattagaa
tatgataaatcttttaatgaagaagattattttaaaactatagaaactatggaaaagtct
atgataaagaatgttttgagtgagattaagtctaaagaaaagaaagtcattagaaaagaa
aattctccaaagactagggaagaggagaataaggatacttctgtcatattaggaagaagt
ataaaagaagatagtatattcatgaaggatttaaatgaaaattctggtatagtagtggta
tgtggagatgtatttaaaaaagaagttatagaaacaaagactgggagaaaaatagtaact
tttttcataacagattacaccaattctatgacagttaaacttttcccaaggcctagagat
gcagatagaataatagaggaaataaaagaggggatttattgcaaagttagaggagaagta
gtaaatgacccttacgcaagagaatgcgtaataatggctaaggatatagtaaaaactaca
aaaatagaaaaaatggatatagcagaggaaaaaagagtagaacttcatatgcatagtcaa
atgagtgccatggatggaatgactccagtatcagaattagtgaaaagagctgctaaatgg
gggcataaagcagtggctattacagatcatggtgtagttcaggcttatccagatgcaatg
tctgcagctaaaaaaggtaatataaaagttatatacggaatagaagcttatcttgtagat
gatggagtacctattgtatctaaagcaggggataaaaccatagaggatacttttgtagtt
tttgatttagaaactacaggcttttccagcaaaaatgataaaataatagaaataggtgca
gtaaagatagaaaagggaaaaatagtagataggtttagtgaatttgtaaatccagaaagg
agcataccagacaaaataacagaacttacaagcataacagatgatatggtagatgataaa
gaagctatagataaaatacttccaagatttatagagtttataggaaactctgtggtggtt
gctcataatgcagcctttgatgtatcttttataaataaaaattgtaaagatctaaaaata
gaatttaaaaatagtgtaatggatactgtaacactaagcagatttttatttcctgaatta
aagagatataaattaaatgttatagcaaagcatttaggcatatcattagagaaccatcat
agagctgtggacgatgctaaagccacagcagatatcttattaaaagcttttgaaatgtta
aaagaaaaagaaataattaccttacataatttaaataaggaatttttaggaaatataaat
ataaaaaaagagcctacctatcatttaataattttggctaaaaatgcagtaggtcttaaa
aatttatataaattagtttctaaatctaatttggagtatttctttaaaagaccaagaatg
gctaaaagtcttataaacgagtataaagaaggacttataataggctctgcctgtgaggcc
ggtcaaatatataaagaaatattaaaagggaaaacaaaagaagaattaaaaaatatgata
gatttttatgattatttagaaatacaacctctagggaataatgaattccttgtaaaaaac
ggttctgtaaaagatgagaaagagcttcaagaaataaataaaaaaatatgtgaattaggt
gagttttataataaacctgtagtagctacctgtgatgtgcattttttagatgaagagcat
gaagtatttagaagaatattaatgtcaggtcaaggctttagtgatgcagataatcaacca
ccactttattttagaaccacagaggaaatgcttaaagaatttgaatatttaggagaggaa
aaggctaaagaagtagtaatttataatacaaataagatagcagatatgatagatgaaata
aaaccaattccagaggaaacttttccgcctaagatagagggagcagaagaagatataaga
agaatgactatagaaaaggctcattctatatatggagatccgcttcctgaaatagtagaa
aaaagattaacaaaagaattaaattctataataaacaatggttatgctgtactttattta
atagctcataagctagtggccaaatcctatgaagatggatatttagtaggatccagagga
tctgttggatcttcctttgcagctactatgtcagatattacagaagttaatggattacca
cctcattatgtttgtcctaaatgtaaatatagtgaattctttacggatgggtctgtaggt
tcaggagcggatttagaggataaggattgcccaaattgcggaactaaattaataaaagat
ggtcatgatataccttttgaaacttttttaggtttcgaaggggataaagaaccagatata
gatttaaatttttcaggagaatatcaaggagtagttcataaatatacagaagttctattt
ggaaaagggcatgtttttaaagcaggaactattggtactatagcagaaaagactgcctat
ggttttgtaaaaaagtatttagatgaaaagaatataaaagctaacaatgcagaaatagaa
agattatccaaaggatgtacaggagttaaaaggacatcgggacagcatccaggaggaatt
atggttgtgcctgcagataatgaaatatttaactttacccctatacaacatccagcagat
gatacagaaagtgacgttataactacccattttgattatcattctataagtggtagactt
ttaaaattagatatattaggccatgacgaccctacagtacttagaatgcttcaggatttg
actcaggtagatcctaaatctgtacctctaggagatccaaaggttataagtttatttaca
tcaccagaggctttaggggttacagaggaggatatagattgtcctgtaggaacttatggg
ctcccagagtttggaactaaattcgtaagacaaatgttattagataccaaaccaaaaagt
tttgcagaattggtaagaatatcaggattatcccatggtacagatgtatggcttaataac
gctcagtattttataaaagaggggtatactactataaaggattgtatatctacaagagat
gatataatggtatatttacttcaaaaggaactgccaccaaagagcgcttttacaataatg
gaaaaagtgagaaagggtaaaggccttacagaggaacaggaagctttaatgaaagaacac
gatgtgccagattggtatatagagtcctgtaagaagataaagtatatgttccctaaaggt
catgctgtagcctatgtaatgatggccatgagaatagcttattttaaagtttattatcca
agggcttattatgctacttatttttctgttagagcggatgattttgatgcagatctaata
gtaaagggagaagaaaaaataaaagaaaaaatgaatgaattatatgctatgggcaataat
ataactcaaaaggataaaggtcttttaactatacttgaaatatgttatgaaatgtataaa
agaggaataaagtttttaaaggtagatttatataaatctaatgctactaaatttttaata
gaaggagatagtataagaccacctttaagcgcccttcaaggtgtaggaaaaaatgcagct
aaaagtatagaagaagctagattagagggcgaatttatatcaaaagaagatttaagatta
agaactaaggttacaaaaactgttatagagactttagaaaatcatggttgcttaagagga
atgcaggaaactaaccaaatatccttatttagcctttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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