KEGG C.botulinum_A3_LochMaree: CLK

Clostridium botulinum A3 Loch Maree: CLK_1039

Entry

CLK_1039 CDS C.botulinum_A3_LochMaree

Gene name deoC

Definition deoxyribose-phosphate aldolase (EC:4.1.2.4)

Orthology K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4]

Pathway cbl00030 Pentose phosphate pathway

Class Metabolism; Carbohydrate Metabolism; Pentose phosphate pathway
[PATH:cbl00030]

SSDB

Motif Pfam: DeoC NanE Radical_SAM AP_endonuc_2

Other DBs NCBI-GI: 170758325
NCBI-GeneID: 6152289
JCVI-Pathema: CLK_1039
UniProt: B1L1S5

Position 1803269..1803907

AA seq 212 aa
MKLSKYIDHTLLKPQATEKDILKLIEEAKTYDFASVCVNPSWVKLAYENLKDTNVKVCTV
VGFPLGATSIASKVYETKVAIEDGADEIDMVIAVGQLKSGNDEYVKEEIKKIVEASKDKL
VKVIIETCLLTEEEKVKACTLSKEAGADYVKTSTGFSTGGAKPEDIKLMREAVGKDMGVK
ASGGIHTREEMEVMIENGATRIGASCGVELVK

NT seq 639 nt +upstreamnt +downstreamnt
atgaaattatctaaatatattgatcatacactattaaaaccacaagcaacagaaaaagat
attttaaaacttattgaagaagctaagacttatgattttgcatcagtttgtgtaaatcct
agctgggttaaacttgcatatgaaaatttaaaagatacaaatgttaaggtttgtactgtt
gtaggatttccacttggagcaacttcaatcgcttctaaagtgtacgaaacaaaagttgcc
attgaagatggtgcagatgaaatagatatggttattgctgttggacaacttaaatcagga
aatgatgaatatgtaaaagaagaaatcaaaaaaattgtagaagcatcaaaggataaatta
gttaaagtaattatagaaacatgcttattaacagaagaagaaaaagtaaaagcatgtact
ttatctaaagaagcaggggcagattatgtgaaaacttcaactggattttcaactggcgga
gcaaaaccagaagatattaaattaatgagagaagcagttggtaaagatatgggagttaaa
gcttctggaggaattcatactagagaagaaatggaagttatgattgaaaatggagctaca
agaattggtgcaagttgtggagtagaacttgtaaaataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-PATHEMA-CBL (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)

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