KEGG   Clostridium botulinum A3 Loch Maree: CLK_2983
Entry
CLK_2983          CDS       T00670                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
cbl  Clostridium botulinum A3 Loch Maree
Pathway
cbl00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cbl00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CLK_2983 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cbl01007]
    CLK_2983 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbl03016]
    CLK_2983 (lysS)
Enzymes [BR:cbl01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     CLK_2983 (lysS)
Amino acid related enzymes [BR:cbl01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   CLK_2983 (lysS)
Transfer RNA biogenesis [BR:cbl03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    CLK_2983 (lysS)
 Prokaryotic type
   Other AARSs
    CLK_2983 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: ACA54800
UniProt: B1KTC1
Position
complement(3861326..3862840)
AA seq 504 aa
MSKEDNVINNFEEQANELMKERFQKLKELQSNGKDPFDVYKVERTHTSKEVKDNYEDLEG
KTVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEEKLKEYKTFDIGDIISVTG
TVFKTKTGETSIHITDFQLVCKSLRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIK
RTAIIKSMREFLDNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKR
LIVGGFEKVYEIGKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVL
GTTKVEYEGAEIDFTPPWRRLTMVDAVKEYAGVDFNIIKDDIEARAIAKEKHIEFKKELK
DCTKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVC
NAYSELNDSIVQKERFMQQLKERELGDDEAYMMDDDFITSLEVGMPPTGGLGIGIDRLIM
FLTDTHSIRDVILFPTMKPQPNNQ
NT seq 1515 nt   +upstreamnt  +downstreamnt
gtgtcaaaggaagataatgtgataaacaattttgaagaacaagcaaatgaattaatgaag
gaaagattccaaaagttgaaggaacttcaatctaatggtaaagatccatttgatgtttat
aaggttgaaaggacccatacttcaaaagaagtaaaggataattatgaagatctagaagga
aaaactgttacagtagcaggaagacttatgtcaaaaagggttcatggaaaagctggattt
tcagatatacatgatagatatggaaaaattcaattatacataaagataaatgatgtaggg
gaagaaaaacttaaagaatataagacttttgatataggtgatataataagtgtaacagga
acagtttttaaaacaaaaacaggagaaacgtcaatacacataacagattttcaattagtt
tgtaaatctttaagaccattaccagaaaagtggcatggattaaaagatccagatttaaga
tatagacaaagatatgtagatttaataataaaccaagatgttagagatacttttataaaa
agaacagctataattaagtccatgagagaatttttggacaatagaggatttttagaagta
gaaacaccaatattatcaccaatagcaggcggggcagcagctaagccttttattactcat
cataatgctttagatatagatatgtatcttagaatagctactgaattatatctaaaaaga
ttaatagtaggtggctttgaaaaagtatatgagattggtaaaaactttagaaatgaagga
atagatataagacataatccagaatttacagctatagaattatatgaagcttatgcagat
tataatgatatgatggaaatcacagaaaatatgatagcttatatatgcgaaaaagttcta
ggtacaactaaagttgaatatgaaggagcagaaatagattttacaccaccatggagaaga
ttaactatggtagatgctgtaaaggaatatgcaggagtagattttaacattataaaagat
gacatcgaggcaagagcaatcgcaaaagaaaaacatatagagtttaaaaaagaattaaag
gattgcacaaaaggtgatgtacttataggattatttgaggaattctgtgaagataaatta
atgcaacctacttttatttgtgattatccagtagagaattcacctcttacaaagaagaaa
agaggaaatgaagcatttactgaaagatttgaaggttttgtatttggaagagaagtatgt
aacgcatattctgaattaaatgattctatagttcaaaaagaaagattcatgcaacaatta
aaggaaagagaattaggtgatgatgaagcctatatgatggatgacgattttataacttca
ttagaagtaggtatgccaccgacaggaggattaggaataggtattgatagattaataatg
ttcttaacagatacacattctataagagacgttatactattcccaactatgaaaccacag
cctaataatcaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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