KEGG   Clostridium botulinum A3 Loch Maree: CLK_3638
Entry
CLK_3638          CDS       T00670                                 
Symbol
addA
Name
(GenBank) ATP-dependent nuclease subunit A
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
cbl  Clostridium botulinum A3 Loch Maree
Brite
KEGG Orthology (KO) [BR:cbl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbl03400]
    CLK_3638 (addA)
Enzymes [BR:cbl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CLK_3638 (addA)
DNA repair and recombination proteins [BR:cbl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     CLK_3638 (addA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 DEAD AAA_12 AAA_30
Other DBs
NCBI-ProteinID: ACA55236
UniProt: B1KUZ8
Position
534278..538117
AA seq 1279 aa
MSSTKWTDEQRQAVFTKNCNLLVAAGAGAGKTAVLVQRIIEKILDKEEPIDIDKLLVVTF
TNAAAAEMRERIGDAISKGLDENPESKALRKQLTLLNKSNIMTIHSFCLQIIKNNFHTIE
IDPNFRICDETEGILMKQEAMDELFDELYEIENKDFINLVESYASRKDTRLQEVVLELHR
FAKSAPFPYDWLLNMAEEFNVGEEFNFEETLWADMIMEDMKVLLHGFKNMLQQSIDVILN
SEGIDYYYEPFKMDLNFINSLLEKSSFKEFRGEIIAYDFPKLPLKRNKDADKEAKERVKK
LRDRVKKKILEIKNILNSYENEFIKKEFIFLYPSMKALSNLVILFDKKYEAKKRERDLID
FNDIEHLCLSILTDKDSEDHIIPSDTALDYRKKFTEVLIDEYQDSNLVQEVIMSMVSRVK
GYWSFYNGQLMFNEEEINLEEPHIGLDIPNRFMVGDVKQSIYRFRQAKPEIFLDKYNEYS
EEESIKNRKVKLFKNFRSREEVINGVNYLFKQIMSKTIGELDYTEEEALKVGASYGEEVK
GEPIELCLMDKKYEISEEVLKEYNMDEEEALDNIQLEGRLVAKKIQKLVGNNLEGGLKVF
DKKLGEYRNLQYRDIVILMRATSNWAPVFVEELAKEGIPVFADTNSGYFNTTEIKTIISL
LQIIDNPLQDIPLLSVLRSPIASFTDDELIDIRMVNKNIAFYECMEIIYKLYKDEELDSY
YSFYMEDEDKTNKIVKDIKEELKNKICSFIEKLNLWRKKSIHIDIDEFIWFLYVETGYYG
YVGALPAGEQRQANLRILFQRAKQYEKTSYKGLFNFINFINKLKFSSGDMGSAKILGENE
NVVRIMSIHKSKGLEFPVVILSGTGKNFNMMDLNKNILFHRDLGYGPDYVDTERRIAYPS
LVKNIIKNKIRLETLSEEMRILYVALTRAREKLIITGLINNMDKTVEDWLNLSDDKNKVP
EYAVMSGKTYLDWIGPALIKHKDAVSLREELKITSGLSNIVDDKSKWKIELWNKKELLKE
KVEENEVEISEKIKETLMNLGESNYKEEIYKKLSFKYKYDNASSIPTKLSVSDVKKQFIL
DEKENTEELFKKVELRKPMFMGEEKKISPSERGTIIHLFMQHLDLKKAENEEDIKEQINR
LIEREFITYEQSKIINPYKILKFCRSELGKRMINSNNINREMPFSIEVPAVEIYRELDKD
IYKDEKLIIQGIIDCYFEEEEGLVLLDYKTDYVNDIEEIKNRYEIQIKYYEEALNRITGK
NVKDKYLYLFSVDNYIKID
NT seq 3840 nt   +upstreamnt  +downstreamnt
atgagtagcactaagtggacagatgagcaaaggcaggctgtttttactaagaattgcaac
ttgcttgtggcagcaggggctggagctggtaagactgctgttttggttcagagaataatt
gaaaaaatattggataaagaagagcctatagatatagataaattattggtagttactttt
actaatgcagctgctgcagaaatgagagaaagaataggagatgctatttctaaaggttta
gatgaaaatccagagtcaaaggcattaagaaaacaacttaccttattaaataagtcaaat
ataatgactattcactccttttgtcttcaaattataaaaaataattttcataccatagaa
atagatcctaattttagaatatgtgatgaaacagaaggaatacttatgaaacaagaagct
atggatgagcttttcgatgaattatatgaaatagagaataaagattttattaatctagta
gaaagctatgccagtagaaaggatactagattacaagaagtagttttagagttacatagg
tttgctaaaagtgcaccattcccttatgattggcttttaaacatggcagaggaatttaat
gtgggtgaagagtttaattttgaagaaacactatgggcagatatgattatggaggatatg
aaggtattattgcatggatttaaaaatatgctacaacaatctatagatgtaatattaaat
tcagagggcatagattattattatgaaccctttaaaatggatttgaattttataaatagt
ttacttgaaaaatcaagttttaaagaatttagaggtgaaataatagcttatgattttcct
aaattgcctttaaagagaaataaagatgcggataaagaggctaaggaaagagttaaaaaa
ttaagagatagagtaaagaaaaaaatattagagattaagaacatactaaattcctatgaa
aatgagtttataaagaaggaatttatatttttatatccttcaatgaaagcactatccaat
ctagtaatactgtttgataaaaaatatgaagccaaaaaaagagaacgagatttgattgat
tttaatgatatagaacatttatgtttatccatattaacagataaggatagtgaagaccat
ataattccctcagatactgctttagattatagaaaaaaatttacagaagtacttatagat
gaatatcaagatagtaatttggtacaagaagttattatgagtatggtatctagagtaaaa
ggatattggagtttttataatggacaattaatgtttaatgaagaagaaataaatttagaa
gaacctcatataggtctagatattcctaatcgatttatggtaggagatgtaaaacaaagt
atatatagatttaggcaggcaaaacctgagatatttttagataaatataatgagtatagt
gaagaagaaagtataaagaatagaaaagtgaagctctttaagaactttagaagcagagaa
gaagtaattaacggtgtaaattatttatttaaacaaataatgtctaaaactataggggaa
ttagattatacagaggaagaggccttaaaggttggagctagctatggagaagaggtaaaa
ggtgaacctatagaattatgtttaatggataaaaagtatgaaataagtgaagaagtatta
aaagaatataatatggatgaagaagaagccttagataatatacaattagagggaagatta
gtagctaaaaaaatacaaaaattagtaggaaataatttagaaggtggattaaaggtattt
gataaaaagttaggagagtacagaaaccttcaatatagagatatagtgattcttatgaga
gctacatcaaattgggcaccagtatttgtagaagagcttgcaaaggaaggtataccagtt
tttgcagatacaaattcaggttattttaatacaacagaaataaagactattatatcctta
ctgcaaataatagataatcctctgcaagatatacctttgctttcagtattaagatctccg
atagcttcttttacagatgatgaacttattgatataagaatggtaaacaaaaatatagct
ttttatgaatgtatggaaataatatataaattatacaaagatgaagaattagattcatat
tatagcttttacatggaagatgaagataagacaaataaaatagtaaaagatataaaagag
gaattaaaaaataaaatatgtagttttatagaaaaattaaatttatggagaaaaaagtct
atccatatagatatagatgagtttatatggtttttatatgtagaaacagggtactatggc
tatgtaggggctcttccagcaggagagcaaagacaggcaaatctaagaatactttttcaa
agagcaaagcaatatgaaaagactagttataaaggattattcaactttataaactttata
aataaattaaaattcagtagtggagacatgggaagtgcaaaaatacttggagaaaatgaa
aatgtagtaagaataatgagtattcataagagtaaaggactagaatttccagtagttata
ctaagtggtactggaaagaattttaacatgatggatcttaataaaaatatattatttcat
agagatttgggatatgggccagattatgtagatacagaaagaagaatagcttatccatcg
ttagttaaaaacattataaaaaataaaataagattagaaactttatcagaggaaatgaga
atattatatgtagctttaacaagggcaagagaaaaacttataataacaggattgataaat
aatatggataaaactgtagaggactggttgaatttatcagatgacaaaaataaagtacca
gaatatgctgttatgagtggaaaaacttatttagactggatagggccagctcttataaaa
cataaggatgctgtaagtcttagagaagagttaaaaatcacatcagggctttctaatata
gtagatgataagtcaaaatggaaaatagaattatggaataaaaaagaattattaaaggaa
aaagttgaagagaatgaagtggaaattagtgaaaaaataaaggaaacactaatgaattta
ggggaaagtaattataaagaagaaatatataaaaaactttcctttaagtacaaatatgat
aatgcctcaagcataccaacaaaattatcagtttcagatgtaaaaaaacaatttatatta
gatgagaaggaaaatacagaggagctatttaaaaaagtagaacttagaaaacctatgttt
atgggggaagaaaagaagatatctccttcagagagaggtactattatacatttatttatg
cagcatttagatttgaaaaaggcagaaaatgaagaggatataaaagaacaaataaataga
ttaatagaaagagagttcataacttatgagcaatcaaagattataaatccatataaaata
ttaaaattttgtaggagtgaattaggaaaaagaatgattaattctaataatataaataga
gaaatgcctttttctattgaagtacctgcagtagaaatttatagggaactagataaagat
atatataaagatgaaaaattaataattcaaggaataatagactgttattttgaagaggaa
gagggactagtattattagattataaaacagattatgttaatgacatagaagaaataaag
aatagatatgaaatacagattaaatattatgaagaagccttaaatagaataacaggaaaa
aatgtaaaagataaatatttatatttattttctgtagacaattatataaaaattgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system