KEGG   Lawsonella clevelandensis: AL705_05815
Entry
AL705_05815       CDS       T04080                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
cbq  Lawsonella clevelandensis
Brite
KEGG Orthology (KO) [BR:cbq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbq03032]
    AL705_05815
   03400 DNA repair and recombination proteins [BR:cbq03400]
    AL705_05815
Enzymes [BR:cbq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AL705_05815
DNA replication proteins [BR:cbq03032]
 Prokaryotic type
  DNA Topoisomerases
   AL705_05815
DNA repair and recombination proteins [BR:cbq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AL705_05815
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4 SBP_bac_3 HC2 Toprim_2
Other DBs
NCBI-ProteinID: ALE19181
UniProt: A0A0M4MY13
Position
1353277..1356138
AA seq 953 aa
MLRKGRDLVAAQAAGEHHLVIVESATKAKKIQNYLGKGYVVTASIGHIRDLPSGAADVPA
KFKKEKWARTGVNVDDDFTPLYVVNPDRKAKVRELKDLLKDADELILATDPDREGEAIAW
HLLEVLKPKVPVKRMVFHEITPEAINEAINNTRDLDFDLVEAQEARRIVDRLYGYEVSPV
LWRKVMPRLSAGRVQSVATRMVVERERERMAFVSAGYWDITAQLSAADRARENTAPTLFP
AKLVEVNGQRIAQGRDFTDKGDLKSGKSTQNVMVLDEAGACSLAEALQGGTADGDGSTAG
QRLAVTSVEEKPYTRRPYPPFMTSTLQQDAANKLHFSSDRTMRIAQRLYENGYITYMRTD
STTLSAAGLNAARQQVQEVFGEKYLYPSPRQYNRKVKNAQEAHEAIRPSGDHFASPDSLR
GVLDAEEFKLYRLIWQRTLASQMADVKGSTMTVRLEGDAPTHPATPVALTASGRTITFPG
FLKVYGAGYGDEQDGESSAGKDTHVPQLAEGDTATVNSATPEGHTTNPPARYTEASLVKA
MEELGIGRPSTYASIIRTINDRGYVVKRGSALVPSWVAFAVVGLMERGFDRLVDYNYTSD
MEDELDAIAEGRENRSRWLSAFYFGDGEASLQKSVPGKGGLKGLIEQNLESLDAREINSL
HLFDDAHGVPVYVRVGRYGPYLERTINSDTAAPTVERANIPDAVTPDELTREKAEELFAV
PTDGRDLGRHPETGHEIVAKDGRYGPYVQEVLPEEDPGKPKTASLFKSMDLKTVTLEQAV
QLLSLPRLLGTDADGEEIVALNGRYGPYVKKGKESRSLEKEEDLFTVTLEEAQKLLAAPK
LRRGQKAAAGPLRTLGEDPATGKPLEVKTGRFGPYVTDGEVNASLRKADSVETMTAERAS
ELLSDRRARLAAGGGKKPARKAAAKKTTAKKTTAAKKTTAKAAASKKAATAQE
NT seq 2862 nt   +upstreamnt  +downstreamnt
atcttgaggaaaggtcgcgatttagtggcagcacaagcagcaggcgagcaccatctggtg
attgtcgaatcggcaacgaaggccaagaagatccagaattatctgggcaaaggctatgtt
gtgaccgcatccattgggcatatccgagacctcccctccggcgccgccgatgttcccgcc
aagttcaagaaagagaagtgggcccgtaccggcgtcaatgtcgacgacgacttcaccccc
ctctacgtcgtcaaccccgaccgcaaggccaaagttcgggaactgaaggatctgctgaaa
gacgccgacgaactcatcctcgccaccgaccccgaccgggaaggcgaggctattgcgtgg
cacctcctggaagtcctcaagcccaaggtaccggttaaacgtatggtgttccatgagatc
accccggaggctatcaacgaggccatcaacaacacccgcgacctcgactttgacctcgtg
gaagcgcaagaagcgcgccgtattgtggaccgcctctacggctacgaagtgtcccccgta
ctgtggcgcaaagtaatgccgcgcctatccgccggacgtgtccagtcggtcgccactcgt
atggtggtggagcgggaacgcgagcgcatggcctttgtctctgccggatactgggacatt
accgcccagctgtctgctgctgaccgcgcccgcgagaatactgcccccacactcttcccc
gccaagctggtggaagtgaacgggcagcgtatcgcgcagggccgcgacttcaccgacaaa
ggcgacctgaagtccggcaagtccacccagaatgtcatggtgttggatgaagccggggca
tgcagtctggcagaagccctgcaagggggtactgcggacggtgacgggtccacggctggc
cagcgtctggccgtcactagtgtggaggagaagccctacactcgccgcccctacccgccg
tttatgacgtcgacgctgcagcaggatgccgccaataagctgcatttctcctccgaccgc
acgatgcgtatcgcgcagcgcctctacgaaaacggctacatcacctacatgcgtaccgac
tccaccacgttgtctgcggccggcttgaacgcggcccgtcagcaggtgcaggaggtcttt
ggggagaagtatctctaccccagcccccgccagtacaaccgtaaggtgaagaacgcgcag
gaagcccacgaggctatccgcccctccggcgaccacttcgcctcgccggactccctgcgt
ggtgtcctggatgctgaagaatttaagctctaccggcttatttggcagcgtaccttggca
tcccagatggccgatgtgaagggctccaccatgacggtgcgtttggaaggggatgctccc
acccacccggccactccggttgccttgaccgcctcaggacgcaccatcacgttccctggt
ttcctcaaggtgtacggcgctggctacggggatgagcaggacggcgagtcctccgctggg
aaggacacccacgtgccgcagcttgccgaaggcgacactgcaacggtgaactcggccacg
ccggaaggccacactaccaacccgcccgcccgctacaccgaagcaagtttggtgaaggcg
atggaagagttgggtattggccgcccctccacctacgccagcattatccgcaccattaat
gatcgcggctatgtggtgaagcgtggctccgccctcgtccccagctgggtagcattcgca
gtggtggggctgatggagcgcggctttgaccgtctggtggactacaactacacctccgac
atggaagacgaactggatgctattgcggagggacgggagaaccgcagccgctggctgagc
gccttctacttcggtgatggggaagcctccctgcagaagtcggtgcccggcaagggcggc
ttgaaggggctcattgagcagaatctggaatccctggatgcgcgagaaatcaactcgctg
cacctttttgacgatgctcatggggtcccggtgtatgtgcgggtgggtcgctacgggcct
tacctggaacgcaccatcaactccgataccgccgccccaacagtggagcgagccaatatt
cccgatgccgtcaccccagacgaactgactcgcgagaaggcggaggaactgtttgcagtg
cccaccgatggccgcgatctgggccgccacccggagacgggccacgagattgtcgccaag
gacggccgctatggtccctatgttcaggaagtgctgccggaggaggatccgggtaagccg
aagacggcgtcgctctttaagtccatggacctgaagaccgtcaccttggaacaggcggtg
cagctcttgagtctgccgcgtctgttggggacagacgcggatggcgaggagatcgttgcc
ctcaatggtcgttatggcccatatgtgaagaaggggaaggaatctcgcagtctggagaaa
gaagaagacctgttcacggttacccttgaagaagcccagaagctgttggcggcaccgaag
ttgcggcgcggacagaaagctgcggcgggaccgctgcggacgctgggtgaggacccggct
accggtaaacctcttgaggtaaagaccggccgctttggcccttatgtgaccgatggtgaa
gtgaatgcctcacttcggaaggccgacagtgtcgagacgatgacggcggagcgcgccagt
gagctgctgtcagatcgacgtgcccggttggcggccggcggaggtaagaagccggcccgg
aaggctgctgcgaagaagaccaccgccaaaaagaccactgcggcgaagaaaaccactgcg
aaagcagcggcttccaagaaggcggctactgcccaggagtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

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