KEGG T01054: CBG00336

Caenorhabditis briggsae: CBG00336

Entry

CBG00336 CDS T01054

Definition

Hypothetical protein CBG00336

Orthology

K10877

DNA repair and recombination protein RAD54B [EC:3.6.4.-]

Organism

cbr Caenorhabditis briggsae

Pathway

cbr03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:cbr03440]

SSDB

Motif

Pfam:

SNF2_N Helicase_C HDA2-3 DUF2439

Other DBs

NCBI-GI:

268534396

NCBI-GeneID:

8574326

WormBase:

CBG00336

Position

AA seq 753 aa
MSRVALNMDSYEGNDTPSVEIARFVVLYGKASTRKHKIWEGDGLLVCYGDSCMLKSEDER
DVICRPQCLSQNAPRSSPHSSTSTQPRRLQMALPTSSNKRYLHLFSTNRIFWIERRLLPS
SPRFARHLRDHQKEGIKFIFDRLKVGEGKKKWAERFWQTIWDWEKVYKRWQPRSKTVSQI
AQSCLIIVPSSLVNNWKSEFEKWWRLMRFPAVIALTAMDIKSYQTTIKTMPYLVISYDLA
QRHVEKLRACRFDVMVCDEGHKLKNLDGRLRKTLLSLEIPRRLILTGTPMQNDFDEFYSI
LNFVCPAKFDSLPRFRLMCNDDVEQLNEIIDECMLRRTAAGIPFSLPDEYILFCAASRIQ
KAIHSEICDYMTGDPLSLIFFARQLANHPKLLLDNLREKNSKTGEKSLKQAQKHTALLLA
FDGPNMPRGAAKESGKLYALADMLKCFRMLQECTVVVSNYIETLDMIEQLCAYLEFRVFR
LDGKTQVQDRQKLVRNFNDQRDPSNIFLLSTKAGGVGLNLIGASRLVLFDSDWNPANDQQ
AMARIWRDGQVRPCHIYRLITTGTIEEKMLQRQIKKTGLGCVIDAIEVGDTVSTFTDEDL
KDIFTFTGDDTECNTHDLCDCSCDGTGMLESEMDEETEEENNTVENMDPSFGLPKREDVA
GIMPEDDDVDDGDIANMEDFDEKVLKTDDVAKAPKKRNWDTSRTIASLAELSRWRHFSPR
HPDTWHHFMVNAGLSQVDTDVDLTFAFYQESKF

NT seq 2262 nt +upstreamnt +downstreamnt
atgtcacgagtggcactcaatatggatagttatgaggggaatgacaccccatcggttgaa
atcgctcgttttgtggtgttatatggaaaagcgtcgactaggaaacacaaaatttgggag
ggcgatggtttgttggtgtgctatggcgattcgtgtatgctgaaatcggaggatgagcgg
gatgtgatttgcagaccccaatgtctctcccaaaacgctccacgttcgtccccccactca
tcgacgtcaacgcaacctcgtcggctccagatggctcttccaacgtcatccaacaaaaga
tacctccatttattctcaacgaacaggatattctggatagaaagacgtcttctgccatca
tcgcccagattcgcacgtcatctgagagatcatcagaaggagggaatcaagtttatattc
gatagattgaaggtgggagagggaaagaagaaatgggcggagcgattctggcagacgata
tgggactgggaaaaagtatacaaacgatggcagccacgctccaagaccgtatcccaaatt
gctcaatcttgccttatcatcgtcccatcctccctcgtgaacaactggaaatcggaattc
gaaaaatggtggagactgatgagattcccagctgtcatcgccctcacagccatggatatc
aaatcgtatcagacgacgatcaaaacgatgccctatctagttatcagttatgatttggct
caacgccacgtggaaaagttgagagcttgccggttcgatgtgatggtgtgtgatgagggg
cataagctgaagaatttggatggacggttgaggaaaacgctcctctccctggaaattcca
cgtcgtttgatcctcaccggcacgccgatgcaaaacgatttcgacgaattctactcgatt
ctgaattttgtgtgccccgcgaaattcgattccctccccagattccgtctgatgtgcaat
gacgatgtggagcaactcaatgagattatcgatgagtgtatgctgagaagaactgcggcc
ggaatccccttttctcttccagatgagtacatcctattctgtgcggcgtctcgaatccaa
aaagcgattcactcggaaatctgtgactacatgactggtgatcccctatcattgatcttc
ttcgctcgtcagctggccaatcatcccaaacttttgctggataatttgagagagaaaaat
tcaaaaaccggagaaaaatctctgaaacaagcccagaaacataccgccttactattggcc
ttcgatggaccgaatatgccacgtggcgccgcgaaggaatccggaaaactttacgctctg
gcagacatgctaaaatgcttccgaatgcttcaagagtgtactgtagtcgtttcgaactac
atcgaaacattggacatgatcgaacagttgtgtgcgtatttggagtttcgtgtctttcga
ttggatggaaagactcaggtccaagatcgtcagaaactggtccgaaacttcaatgatcaa
cgggacccatccaacatcttcctgttgagcacaaaagccggtggagttggactcaatctc
atcggagcatctcgtttggttctgtttgattccgattggaatccggcgaatgatcaacag
gcgatggcgagaatttggagagacggacaagtcaggccatgtcatatttatcgattgatt
actacgggaacaatcgaagagaaaatgctgcaaagacaaattaagaaaaccggattggga
tgtgtgattgacgccattgaagtaggagacaccgtctccacattcaccgacgaagatctc
aaggacattttcacattcaccggcgacgacaccgaatgtaacacgcacgatctctgtgat
tgctcatgcgacggcaccggaatgttggaatctgaaatggacgaagaaacagaagaagaa
aacaatactgtagagaacatggacccatcgtttgggcttccaaaacgagaagacgtcgct
ggaatcatgccagaagatgatgatgtggatgatggagatatcgcgaatatggaagatttc
gatgaaaaggttttgaagactgatgacgtggcaaaagctccgaagaagagaaattgggat
acctctcgtaccatcgcctcactcgccgagctatcccgctggcgccatttctccccacgt
catccggacacgtggcatcacttcatggtcaacgctggactctcccaggtggacactgat
gttgacctcactttcgccttctaccaggaatcgaagttttga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF

DBGET integrated database retrieval system