Entry |
|
Gene name |
Cbr-ife-1
|
Definition |
(RefSeq) C. briggsae CBR-IFE-1 protein
|
KO |
| translation initiation factor 4E |
|
Organism |
cbr Caenorhabditis briggsae
|
Pathway |
| RNA transport | | mTOR signaling pathway |
|
Module |
|
Brite |
KEGG Orthology (KO) [BR:cbr00001]
Genetic Information Processing
Translation
03013 RNA transport
CBG24279 (Cbr-ife-1)
Environmental Information Processing
Signal transduction
04150 mTOR signaling pathway
CBG24279 (Cbr-ife-1)
Messenger RNA biogenesis [BR:cbr03019]
Eukaryotic Type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CBG24279 (Cbr-ife-1)
mRNA cycle factors
Common to processing body (P body) and stress granule
CBG24279 (Cbr-ife-1)
Translation factors [BR:cbr03012]
Eukaryotic Type
Initiation factors
eIF-4
CBG24279 (Cbr-ife-1)
 |
SSDB |
   |
Motif |
 |
Other DBs |
NCBI-GeneID: NCBI-ProteinID: WormBase: UniProt: |
Position |
III
|
AA seq |
215 aa  
MTEHEEESNHSSSALYPLKRHWTWWYLNDERTKSWEDRLKKVYTFSTVPEFWALYDAIRP
PSGLNPMCDYNVFRDDIQPMWEVPENANGGRWLIAVDKSKQDMVDAIWLEILMALVGEQF
GKDMESICGLVCNVRGKGSKISVWTKDCNDDETNLRIGVVLKEKLMAASKDLTKPLFDVI
RYEDHDSCQKKTSSLVKAKLSLHSAENPEKPVGSL |
NT seq |
648 nt  +upstreamnt +downstreamnt
atgaccgagcacgaggaggagtccaaccactcttcatcagctctctaccctctgaagaga
cactggacgtggtggtatttgaacgatgagcgtacgaaatcgtgggaggatcgtctgaag
aaggtgtacaccttctcgacggttccagaattctgggctctctacgacgccatccgaccg
ccaagtggtctcaacccaatgtgcgactacaacgtcttccgcgacgatatccagccaatg
tgggaagttccggagaacgcgaacggtggacgctggctcatcgctgttgataaatcgaaa
caggacatggtcgatgcgatctggctggagattctgatggcgttggttggcgagcagttt
ggaaaggatatggagtcgatttgcggactggtatgcaatgtgagagggaagggatcgaag
atcagtgtctggaccaaggattgcaatgatgatgagaccaatttgagaattggagtggtc
ctcaaggagaagctgatggcagcatcgaaggatctcacaaagccactcttcgacgtcatc
cgctacgaagatcacgacagttgccagaagaagacaagctcactcgtcaaggcgaaactc
tcacttcactcggccgagaatccggagaagccagtgggatcgttgtga |