KEGG   Citrobacter braakii: A6J81_21065
Entry
A6J81_21065       CDS       T04825                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
cbra  Citrobacter braakii
Brite
KEGG Orthology (KO) [BR:cbra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cbra02044]
    A6J81_21065 (tssC)
Secretion system [BR:cbra02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   A6J81_21065 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: ARC43008
Position
4324851..4326380
AA seq 509 aa
MSVQEHTSSVATTTTSERSVYQSLFDKINLSPVSTLKNVDAWQSDEALSDAAPAERVTAA
IQVLVSCLADAAQPVERLDKTLLDEQIARLDKQISDQVNEVMHHAEFQKQESLWRGLHSM
ITGIDFRRNVRVEMMDISKDALRDDFDDAPELIQSGLYRHVYIEEYDQPGGEPIAAMISA
YEFDNSPQDIALLRNISGVSAACHMPFIGSVGPKFFLKENMEEVAAIKDINDYFERAEYI
KWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYLWTSASFSF
AVNMVKSFIKNGWCVQIRGPQAGGAVKDLPIHLYDLGTGNQVKIPSEVMIPETREFEFAN
LGFIPLSYYKNRDYACFFSANSAQKPAQFDTPEATANSRINSRLPYIFLLSRIAHYLKIL
QRENIGTTKDRRLLELELNNWLRSLVTEMTDPGDDLQASHPLRDGRVVVEDIEDNPGFFR
VRLYAIPHFQVEGMDVSLSLVSQMPKSKS
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtctgttcaggaacatacctcttcagtcgcgaccaccacgaccagtgaacgcagcgtt
tatcaatccctctttgacaaaattaatctttccccggtttcgacattaaaaaatgttgat
gcatggcagagcgatgaagcgctttctgacgccgctcccgctgaacgcgtgactgctgct
attcaggttctggtttcatgtctggcggatgctgcgcagcccgtagagcgcctggataaa
acgctgctcgatgagcaaattgctcgtcttgataagcagattagcgatcaggtcaatgaa
gttatgcaccatgctgaatttcagaagcaagaatcgctctggcgtggtttgcattcgatg
atcaccggcattgattttcgccgaaatgtccgtgtagaaatgatggatatcagcaaggat
gcgctgcgtgatgactttgacgatgcgccggagcttatccagagcgggttataccgccat
gtttatattgaagaatacgatcagcctggcggcgaacccattgcggcaatgatttcagcg
tacgaatttgataacagtccgcaggatattgcactgctgcgcaatatttctggcgtgtcg
gcggcctgtcatatgccgttcattggttccgttgggccgaaatttttcttgaaagaaaat
atggaagaagtcgcagctataaaagatatcaatgattatttcgaacgtgctgaatacatc
aagtggaaagcatttcgtgatagcgacgattcacgctatatcgggctaactatgccgcgt
gtcctgggtcgtttaccgtatggccctgataccgtgccggtacgcagttttaactatgtt
gaagaagttaagggtccggatcacgaaaagtatctatggaccagcgcctctttctctttc
gctgtgaatatggtgaaaagttttatcaagaatggctggtgcgtccagatccgtgggcca
caggcaggcggcgcggtgaaagatttgcctatccatttgtacgatctgggtaccggtaat
caggtgaagatcccgtctgaggtgatgattccggaaacccgggagtttgaatttgccaac
ctcggttttattccgctttcttattataagaatcgtgattacgcctgtttcttctctgct
aactcggctcaaaaacctgctcagtttgatactccggaagcgacggctaacagtcggatt
aactctcgtttgccgtatatcttcttgctttctcgtatcgctcattacctgaaaatactg
cagcgagaaaatattggaacgaccaaagatcgccgcctgcttgagcttgaacttaataac
tggctgcgcagtctggtaaccgaaatgaccgatcctggcgatgacttgcaggcatcacac
ccgctgcgtgatgggcgtgtcgtggtggaggatattgaggataacccaggtttcttccgt
gtgcgcctgtatgccattccgcatttccaggttgaaggtatggacgtcagcttgtcgtta
gtttcacaaatgcctaagtcgaaatcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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