KEGG   Clostridium botulinum E3: CLH_3034
Entry
CLH_3034          CDS       T00767                                 
Name
(GenBank) conserved hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cbt  Clostridium botulinum E3
Pathway
cbt03420  Nucleotide excision repair
cbt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLH_3034
   03430 Mismatch repair
    CLH_3034
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbt03400]
    CLH_3034
Enzymes [BR:cbt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CLH_3034
DNA repair and recombination proteins [BR:cbt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CLH_3034
   MMR (mismatch excision repair)
    Other MMR factors
     CLH_3034
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C DEAD PhoH Viral_helicase1 SLFN-g3_helicase AAA_30 ResIII nSTAND3 CbiA zf-C2H2_aberr AAA_11 DUF5740 NACHT UvrD_C_2 AAA_14
Other DBs
NCBI-ProteinID: ACD51427
Position
complement(3262445..3264556)
AA seq 703 aa
MNQNLDFLMEQNKLEEVEKILSGEILNYLEKRKNITSQILQSRKKFIEEYKDDEDQVIDY
FDHENYVKEEAYKTIDKRLKEFTSLKEAPYFGKVTFMEQGNLPEELYIGRYGLTVEKTYE
SIIVDWRAPIASLFYKGILGKSSYTCPTGEIDTDILSRRQIIIKKGELKGIFDSEVDVKD
EILQMVLTENSSDKLKDIVMSIQSEQDEIIRSDKNKVVVVNGVAGSGKTTIALHRISYLL
YNYRKQFGDKVLIFGPNDIFMDYIAQVLPSLGEEGIKQMTYENFAMAQLGIDNLNIKSFS
KYIEEAMSGDAIALEEYKYKSSKKFLDLLNHKIDKLSKNYFDIKPITFNGEEIVGIKEIT
ELFDIHYKYMPLFRRSEKIKRVLISKIKDKRDAEVYKLNQEMKEKIASLSSDDFEIEKNN
LDYIKRMKIREIVRNVINSRKELDSWISHEDIINIYKNVTDTKQLGYMDLSGILYLMIKL
DGRRMKEDIKHIVIDEAQDYSVIQFEVIKGLTGCKSYTIVGDSNQRLINNNEDPAMLNLQ
PLFNEDKMHVQVQEYALNKSYRSTQEIMEYATKFLDDNRIIPLVRHGEKVIEEEVSSDDE
FVETILSIIEDYEDEGLENIAIIFNGNKDLAKYSHLIKEKMSIQSFDREDILYKGGKVLI
PAYLAKGLEFDGVIVIENHEIDPLVKYIMCTRALHRLSLIKKQ
NT seq 2112 nt   +upstreamnt  +downstreamnt
ttgaatcaaaatttagattttttaatggaacaaaataagctagaagaagttgaaaaaatt
ttaagtggtgaaatactaaattatctagaaaaaagaaagaatataactagtcaaattctt
caatcaagaaaaaaatttattgaagaatataaagatgatgaagatcaagttatagattac
tttgatcatgaaaattatgtaaaagaagaagcttataagacgatagataaaagattaaag
gaatttactagcttaaaagaagcaccttatttcggtaaagtaacctttatggaacagggg
aatttaccagaagaactttatataggtagatatggcttaactgtagaaaaaacttatgaa
tctataattgtagactggagagcgcctattgcatctttattttataagggtatattagga
aagtctagttatacatgtccaactggtgagattgatacagatatactttctagaagacaa
ataataattaaaaaaggtgaacttaaaggtatatttgattcagaggtagatgttaaagat
gaaatacttcaaatggttcttactgaaaattcatcagataaacttaaagatatagtaatg
tcaatacaatctgaacaagatgaaataataagaagtgataagaataaagttgtagtagta
aatggagttgcaggctcaggaaaaacaactattgcattacatagaatatcttatcttctt
tataattatagaaaacaatttggagataaagttcttatctttgggccaaatgatatattt
atggattatattgctcaagttcttccttcattaggtgaagaaggaataaagcaaatgaca
tatgaaaactttgctatggcacaattaggaatagataatttaaatataaaaagttttagt
aaatatatagaggaagctatgagtggagatgcaatagctcttgaagaatataaatataaa
agttctaaaaaattcttagatttattaaatcataagattgataagttaagtaaaaattat
tttgatattaaaccaataacttttaatggtgaagaaatagtaggaattaaagaaattaca
gagctatttgatatacattataaatacatgcctttatttagaagaagtgaaaaaataaaa
agagttcttatatctaaaataaaagataaaagagatgctgaagtatataagctaaatcaa
gagatgaaagaaaaaatagcctctttatcaagcgatgatttcgaaatagaaaagaataat
ttagattatataaagagaatgaaaattagagaaattgtaaggaatgtaattaattcaaga
aaagaattggattcttggataagccatgaagatataataaatatttataaaaatgtaaca
gatactaagcaacttggatacatggacttaagtggaatattatatttaatgattaaatta
gatggaagaagaatgaaagaagacattaaacatattgtaatagatgaagctcaagactat
agtgttatacaatttgaagtaataaaagggcttacaggatgtaaaagttatacaatagtt
ggagattctaatcaaagattaataaataataatgaagatccagctatgttgaatttacaa
ccattgtttaatgaagataaaatgcatgtacaagtacaagaatatgcattaaataagagt
tatagatctactcaagaaataatggaatatgcaactaaatttttagatgataatagaata
attccattagttagacatggtgaaaaggtaatagaagaagaagtatcttcagatgacgaa
tttgtagaaactattctttcaataattgaagattatgaagatgaaggtcttgaaaatata
gctattatatttaatggaaacaaagatcttgctaaatattctcatcttattaaagaaaaa
atgagtattcaaagttttgatagagaagatatactttataaaggtggaaaagttttaata
ccagcatatttagcaaaaggactagaatttgacggagttatagtaatagaaaatcatgaa
attgatccattagtaaaatatattatgtgtacaagagcattacacagactttcactaatt
aaaaaacaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (27)   

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