KEGG   Candidatus Symbiobacter mobilis: Cenrod_2010
Entry
Cenrod_2010       CDS       T02877                                 
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
cbx  Candidatus Symbiobacter mobilis
Brite
KEGG Orthology (KO) [BR:cbx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cbx03009]
    Cenrod_2010 (rluD)
Enzymes [BR:cbx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     Cenrod_2010 (rluD)
Ribosome biogenesis [BR:cbx03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Cenrod_2010 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AGX88082
UniProt: U5N9J7
Position
complement(2202968..2204125)
AA seq 385 aa
MAKNGRECISGTFSGVFAETFPTPLSGALSQPPSGSPLAGCPSRDSDGGQGPDQSADQGY
AKGSAISSAGPTVRTLHVPDTAHGRRLDQVLHAAMGECSRNYLQQLIEAGAVRINGAIVT
RPAHKVRALDEAAVELRPTPQSQSFTAEHAALDLVYEDEHLLVVHKPAGWVVHPAPGHWG
GTLMNALLGYDERAFDLPRAGIVHRLDQDTSGLMVVARTRYAMDALVLAIAERRVHRQYI
ALAHGAWTGPARRRVDAAIGRDPRHRLRMAVLDAKRPGAKPAQTDIVALGSVAQGCLVRC
TLHTGRTHQIRVHMASIGHPLVADSLYGGAPAAGMTRQALHADKLAFHHPITATPLAFHI
PWPQDMVHAIEIWGLPYNDSAQIVH
NT seq 1158 nt   +upstreamnt  +downstreamnt
gtggccaaaaacggtcgggagtgtatatcgggcaccttttctggcgtctttgcagaaacc
tttcccacccccttgtctggcgccctgtcacaacccccgtcgggttcccccttggcagga
tgcccgtcaagggatagcgacggaggccaaggccctgaccagagtgctgaccagggttat
gcaaaaggtagcgcaataagcagcgcaggccccacggtgcgcaccctgcacgtccccgat
accgcgcacgggcgccgtctggatcaagtgctgcacgctgcgatgggggagtgctcccgc
aactatttgcagcagttgatcgaagccggagccgtgcgcatcaacggcgccatcgtcacc
cgccctgcgcacaaagttcgcgccctcgacgaagcagccgtggaactgcgccccacgccg
caaagccaatccttcaccgccgaacacgccgcgctcgacctcgtctatgaagacgaacac
ctgctcgtcgtccacaaacctgcgggttgggtggtacaccccgcccccggccactggggc
ggaacgctgatgaatgctttgttggggtacgacgaacgcgctttcgacctgccccgcgcg
gggatcgtccaccggctcgaccaagacacgagcgggctgatggtcgttgcccgcacccgt
tatgcgatggatgccctggtacttgccattgccgagcgacgggtccaccggcagtacatc
gccctggcgcatggcgcatggactggccccgcacggcgcagggtggatgcggcgataggc
cgcgacccgcgccaccgcttgcgcatggccgtgctcgacgcgaagcgcccaggcgccaag
cccgcgcagacggacatcgtggccctaggtagcgtggcgcagggctgcttggtgcgatgc
accctgcatacaggcagaacccaccagattcgcgtacacatggcgtcgatcgggcacccg
ctcgttgcggattccctctatggcggtgcccccgcagcaggcatgacccggcaggcgcta
cacgccgacaagctggccttccaccatccgattaccgcaacgcccctggctttccatatc
ccttggccgcaagacatggtgcatgccatcgagatttggggccttccctacaatgattca
gcccagatagtccattag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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