KEGG   Clostridium beijerinckii ATCC 35702: Cbs_4951
Entry
Cbs_4951          CDS       T03415                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
cbz  Clostridium beijerinckii ATCC 35702
Pathway
cbz03030  DNA replication
cbz03430  Mismatch repair
cbz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cbz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Cbs_4951
   03430 Mismatch repair
    Cbs_4951
   03440 Homologous recombination
    Cbs_4951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbz03032]
    Cbs_4951
   03400 DNA repair and recombination proteins [BR:cbz03400]
    Cbs_4951
Enzymes [BR:cbz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Cbs_4951
DNA replication proteins [BR:cbz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Cbs_4951
DNA repair and recombination proteins [BR:cbz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Cbs_4951
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA DNA_pol3_delta_C AAA_22 RuvB_N AAA_assoc_2 AAA_19 AAA_30 AAA_18 DUF815 Rad17 AAA_14 AAA_24 Mg_chelatase AAA_5 LexA_DNA_bind
Other DBs
NCBI-ProteinID: AIU00502
Position
complement(5823312..5824958)
AA seq 548 aa
MGYTALYREWRPKNFEDVVGQEHITTTLKNEILNDRIAHAYLFCGTRGTGKTSTAKVMAK
ALNCLDLQNGEPCNECEMCRKINEGLAIDVTELDAASNNGIDKIRDIIDDTKYPPQEARY
KIYIMDEVHMLSVGAVNAFLKTLEEPPKRVIFILATTDPQKLPITILSRCQRFDFKRISQ
KEISSRLKKITDSQGITYEQKSLDLISRVCDGAMRDALSILDQAIAMGEDKINYEDLVSI
LGLVTNEYLFDITYAIIDRSIEKSMIIIDKLVYSGKDMQLFIKDLIAHFRNLLMVKVTNN
PEEVLDMSLENIHLIKEQGRKIRVEEIMRAIRILQDSETNSKASKQSRLYLELAIIKMCK
IEYDTSNEVILSRINKLEESLKTGKIRMVQSENINEELKSAHNNIGTNSNNNQSRNAINK
GNINSNSVNLEANPNSSLTVDDVGRVWTEILEKFKAKRAMIVYASIVTAKPYSLKNGIAT
LEYDSMYAFNKDRLQKAEYREIVNTVFSEVLKEKVIVDYVVKNDNEVKDQEELLKETIEG
IPFEIYDE
NT seq 1647 nt   +upstreamnt  +downstreamnt
gtgggttatacagcactatatagagagtggagaccaaagaattttgaagacgttgttgga
caggaacatataactacaacgttaaaaaatgaaattttaaacgatagaattgcacatgct
tatcttttttgtggaactagaggaacaggaaaaacatcaactgcaaaagtaatggcaaag
gcattaaattgtctagatttacaaaatggagaaccatgtaacgagtgtgagatgtgtaga
aaaataaatgagggattagcaattgatgtaacagaacttgatgccgcttctaataatggt
atagataagattagagacattatagatgatacaaaatatccgccccaggaagctaggtat
aaaatatatataatggatgaggttcatatgctttcagtaggagcagttaatgcgttctta
aaaactttagaagagcctcctaagagagtaatatttatattagccacaacagatccgcaa
aagctacctataactattctatctagatgtcaaagatttgattttaagagaataagccaa
aaagaaatatctagcagacttaaaaagataacagattctcagggaataacttatgagcaa
aaaagtttggatttaatttcaagagtctgcgatggtgcaatgagagatgcattaagtata
ttagatcaagcgattgctatgggtgaagataaaattaactacgaagatttagttagtata
ttgggacttgtgacaaatgaatatttgtttgacataacttatgccattatagatagaagt
attgaaaaatccatgattataattgataagcttgtttattctggtaaggatatgcaattg
ttcattaaagatttaatagcacattttagaaatttacttatggtaaaggttacaaataat
ccagaagaagttttagacatgtctcttgaaaatattcatttaattaaagaacagggaaga
aagattagagtagaagaaataatgagagctattagaatacttcaggattcggaaacaaat
tcaaaagctagcaagcaaagtagattatatttagagcttgctattataaagatgtgtaaa
attgagtatgatacttcaaatgaggttattttatcaagaataaacaagttggaggaatca
ttaaaaactggcaagattcgaatggttcaatcagaaaatattaatgaagaattaaaatct
gcacataataatataggaactaattcaaataataatcaaagtagaaatgctattaataag
ggtaacataaatagtaacagtgttaatttagaagctaatccaaattcatcgttaacagta
gatgatgttgggagagtatggacagaaatattagaaaagttcaaggcaaagagggcaatg
attgtttatgcttcaatcgttacagcaaagccatatagcttaaaaaatggtatagctaca
cttgaatatgattcaatgtatgcatttaataaagataggttgcagaaggcagaatacaga
gaaattgtgaataccgtattttcagaagttctaaaggaaaaagtaattgtagattatgta
gtaaaaaatgataatgaagtaaaagatcaagaagagttattaaaagaaacaatagaagga
ataccatttgaaatatatgatgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (29)   

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