KEGG   Cajanus cajan (pigeon pea): 109801889
Entry
109801889         CDS       T04868                                 
Name
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
  KO
K14780  ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
Organism
ccaj  Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccaj03009]
    109801889
Enzymes [BR:ccaj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     109801889
Ribosome biogenesis [BR:ccaj03009]
 Eukaryotic type
  90S particles
   Helicases
    109801889
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD HA2_N AAA_22 ATPase nSTAND3 AAA_19
Other DBs
NCBI-GeneID: 109801889
NCBI-ProteinID: XP_020218637
Position
7:complement(13335069..13341541)
AA seq 1326 aa
MQTLENFGDNIEFNSQSLGDGDSNALILPAKRMKKRKGKEQEHGKLQSNKKQKLSKPQKR
KMKKKLENDKEKQLLLEKAIKTLNENTLPEYAYPLLLSTCNINRDETAKEKRRRAVHLLK
EGLEVPDNGLSKKPETDEIHLAQADEVKEIDIIQIQPIRSEEVLNTISVPLESSQEPVPG
NDVENYKYVSEPLADISIKQLDEIRCSPMSCSNDEIKSTKSKDKSDDNQDSNFKEFGNLL
DYSSTRPPNVPTVVHVHRPTEVEDKRKDLPIVMMEQEIMEAINDRSSVIICGETGCGKTT
QVPQFLYEAGYGSSKGVIGVTQPRRVAVLATAKRVAYELGFRLGKEVGFQVRYDKKIGES
CSIKFMTDGILLREVQNDILLRRYSVIVLDEAHERSLNTDILIGMLSRVIKTRQMIYNEQ
KKLILSGESISPEKIIFPLKLVLMSATMRVQDFTSGKLFHTPPPVIEVPTRQFPVTAYFS
KKTEKTDYIGEAYKKVLAIHKRLPSGGILVFVTGQREVEDLCRKLRKASKEFIKKRVEES
VESDSTVVHETNSIEGVNINEINEAFMVQGSSSFQQTDRFSGYDEDEDNVNWNESDFSYD
SETESELEFDDDDDLELSENKSNIVDALGQVESLASLKAAFEKLSGQATLSSSNGEQTFS
ANIEGNVEETKVSREKRGRENCNLSPGALFVLPLYAMLPAAAQLRVFEEVKEGERLVVVA
TNVAETSLTIPGIKYVVDTGREKVKNYDPSNGMETYEVQWISKASAAQRAGRSGRTGPGH
CYRLYSSAAFNNEFPEHSPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLKAASLLEAE
NCLKALEALDSNDELTLLGKAMAHYPLSPRHSRMLLTLIKNTRHEHKCNQNMLLAYAVAA
AAALSLSNPFVMQYEDDSSRDSEMSEKPSMRDSEKDTAKKEKSKRKKLKETAKVAREKFR
VLTSDALTIAFALQCFEHSQKSVQFCDDNALHFKTMDEMSKLRQQLLKLVFYQSDKGGFE
KEYSWNHGTLEDVECAWQVSSGKYPLSLVEERLICQAICAGWADRVAKRVTASSRASDGE
RTSRILRYQSCMVDESVFLHRWSSVSIVGPEFLVYNELLETKRPDKEGITSAKRAYMHGV
TSVEPAWLVEHARSSCILSPPLLDPRPYYDAQTDQVKCWVIPTFGRFCWELPKYSLPISN
DEHRVQVFAYALLEGQVCPCLKSVRKYMSAPPESIMKREAFGQKRVGNLLAKLKSRLIDS
SAMLRMVWKENPRELFSEILDWFQKSFHRQFEDLWLQMLHELLMETQERPLHKSSKKKKG
KSKTLR
NT seq 3981 nt   +upstreamnt  +downstreamnt
atgcaaactttggaaaatttcggagacaatatcgagttcaattctcaaagtttgggagat
ggtgatagtaatgcactaattttgcctgctaagagaatgaagaaaaggaaagggaaggaa
caggaacatggaaaactccaatcaaataagaaacagaaattgagcaagcctcagaaaagg
aagatgaagaagaagttagagaatgacaaggagaagcaacttctgctggaaaaagccatt
aagacattgaatgaaaacacacttccagagtatgcatatcctcttttgctgtcaacatgc
aatataaatcgggatgaaactgcgaaggagaagcgtagaagggctgtgcatttattgaaa
gaaggattggaggttccagataatgggctgtctaagaaacctgaaacggatgagattcat
ttagcccaagctgatgaagtcaaagaaattgacatcattcaaattcaacccattagatca
gaagaagtcttaaatacaatttccgttcctttggagtcctctcaagaaccagttcctggc
aatgatgttgaaaattataaatatgtttctgaacctcttgctgacatttccattaagcaa
ctggatgaaatcagatgctctcccatgtcttgttctaatgatgaaataaaaagcaccaag
tcaaaggataagtcagatgataaccaagattccaatttcaaagaattcggcaaccttctg
gattattcttcaactaggcctccaaatgttcctactgttgtgcatgtgcacagaccaaca
gaagttgaagacaaaagaaaggatctgcctatagtcatgatggagcaagagataatggaa
gctataaatgaccggtctagtgttatcatatgtggagaaactgggtgtggtaaaacgact
caagttcctcagtttctttatgaagctggctatggttcaagtaagggtgttattggtgtt
actcaacctcgccgtgtggctgttcttgccacagctaagcgtgtggcatatgagcttggt
tttcgtctagggaaggaggttggttttcaagtcagatatgacaaaaagattggagaaagt
tgttctatcaagtttatgactgatggaattttgctacgagaagttcagaatgatattttg
ttgaggcgttattctgtcatagttcttgatgaggctcatgagaggagcttgaacacagac
attctgatcgggatgctctcacgtgtaattaaaactcgccaaatgatttataatgaacag
aaaaaattgatactttcaggagaaagcataagtcctgaaaaaatcatttttccattaaaa
cttgttcttatgagtgccaccatgcgagtacaagacttcacttctggaaagttattccat
actcctccacctgttatagaagttcctacaaggcaatttccagtaacagcatacttctca
aagaaaacagagaaaacagattacattggagaagcatataagaaggtcttggcaattcac
aagaggttgccatctgggggcatacttgtctttgttactgggcaaagggaagtagaggac
ttatgcaggaagttacgtaaagcatcgaaggagtttatcaagaaaagagttgaagagtct
gtggaaagtgatagcactgtggtccatgaaacaaattctattgagggagtaaatattaat
gagatcaatgaagcatttatggtccaaggaagttcatccttccagcaaactgatagattt
agtggttatgatgaagatgaggataatgtaaattggaatgaatctgatttttcttatgac
tcagaaacagaaagtgaactggagtttgatgatgatgatgatcttgagctatcggagaac
aagagtaatattgttgatgccttaggacaggtggaaagtcttgcttcactgaaggctgct
tttgaaaaattgtctgggcaagccacattaagctcctcaaatggagagcagacattttct
gcaaatatcgaaggaaatgtagaggaaacaaaagtttccagggagaaaagaggtcgagaa
aattgtaatctttctccaggtgcactctttgttctacctctgtatgccatgcttcctgca
gcagctcaacttcgtgtgtttgaagaagtcaaggagggagagaggcttgttgttgttgcc
acaaatgttgctgaaacatctttaacaattccagggataaagtatgtggttgataccgga
agagaaaaggtgaagaattatgacccctctaatggcatggagacatatgaagtacaatgg
ataagtaaggcatctgccgcacagcgtgcaggcagatctggaagaactggacctggacac
tgctatcgtctctattcttctgcagcctttaataatgaatttcctgagcactctcctgct
gaagttgagaaagtacctgttcatggtgttgtccttctcttgaaatccatgcatattaaa
aaggttgcaaacttcccatttcctacttctcttaaagctgcttctctgcttgaggctgaa
aattgcttgaaagctcttgaagcacttgatagcaacgatgaacttacacttttggggaaa
gccatggcacattatcccttgagtcctcgtcattctagaatgctcctcactcttattaaa
aatacaagacatgagcataaatgtaatcaaaatatgcttttggcatatgctgttgcagct
gctgcagctttgagtttgtcaaatccttttgtaatgcaatatgaagatgacagcagcaga
gattcagagatgtctgagaaacctagcatgcgagacagtgagaaagacactgctaaaaaa
gaaaaatccaagagaaagaaactaaaagaaacagctaaagttgcacgtgaaaaattccga
gttctcactagtgatgccttaaccatagcttttgctttgcagtgttttgaacattcacaa
aaatcagtacaattctgcgatgacaatgcattgcatttcaaaaccatggatgaaatgtcc
aaacttcgacaacagctacttaaactggtcttttatcagagtgataaaggtggttttgaa
aaagagtactcatggaatcatggaacattagaggatgtagaatgtgcttggcaggtttct
tctggaaaataccctctttctctggttgaggaaaggctcatctgtcaagcaatatgtgct
ggctgggcagatagggttgctaaacgtgttacagcttcttctagggcctctgatggagag
agaacttctcgcattttaaggtaccaatcatgcatggttgatgaaagtgttttccttcat
cgttggtcatcagtttccattgtaggccccgagtttttggtttacaatgaactattagag
accaaaagaccagacaaagaagggataacaagtgccaagagagcatatatgcacggagta
actagtgtagagccagcttggctcgttgagcatgcaaggtcttcatgcatcttatctcct
ccccttctggatcctagaccttactatgatgctcagactgaccaagtaaaatgttgggta
atcccaacctttggacgtttctgttgggagcttccaaaatattcattgcccattagcaat
gatgaacaccgggtgcaagtgtttgcctatgcattgcttgaaggccaggtgtgtccctgt
ttaaaatctgttcgaaaatacatgtctgctccacctgaaagtattatgaagagagaagca
tttggtcaaaaaagggtgggaaatcttttagccaagttaaagagcaggctgattgatagt
tctgctatgttaagaatggtgtggaaggagaatccaagggaattattttcagaaattttg
gattggtttcagaagagttttcacagacaatttgaagacttgtggttacaaatgcttcat
gaactgcttatggagacacaagaacgccctctgcataaaagttctaaaaagaagaaagga
aaatctaaaacactacgataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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