KEGG   Cajanus cajan (pigeon pea): 109803852
Entry
109803852         CDS       T04868                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03020  RNA polymerase
ccaj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109803852
  09124 Replication and repair
   03420 Nucleotide excision repair
    109803852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccaj03021]
    109803852
   03400 DNA repair and recombination proteins [BR:ccaj03400]
    109803852
Transcription machinery [BR:ccaj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109803852
  RNA polymerase III system
   RNA polymerase III
     109803852
  RNA polymerase I system
   RNA polymerase I
     109803852
DNA repair and recombination proteins [BR:ccaj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109803852
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Glucodextran_N DUF2405
Other DBs
NCBI-GeneID: 109803852
NCBI-ProteinID: XP_020221110
Position
8:complement(16390740..16394950)
AA seq 213 aa
MACVATWVDRGSTESHRYFLSRRTVLEMLHDRGYDVLHHASLTPSLNDFRSRFGQQPNHQ
ALGFCVSHLSHPSNMVQVVFTGSDHIRKGTVSEIFNLIVDRENLKALILIVQSKMTSFAR
KDLETCPFKVEIFRITDLLVNITKHVLQPKHEVLTDDEKKALLTKYSLEDKQLPLILKTD
AIARYYGYEKGQVIKITHSGPLIESYVSYRCVV
NT seq 642 nt   +upstreamnt  +downstreamnt
atggcgtgcgtcgcaacttgggtagacagagggagcacggagagccatcgctacttcctc
agtcgccgaaccgtgctggagatgcttcacgacagaggctacgacgtccttcaccatgcc
agcctcactccctccctcaacgacttccgttcccgcttcggccaacaacccaatcaccaa
gccctcggtttctgcgtttcgcatctctctcatccctccaacatggtgcaggtggtgttc
acgggatccgatcacataagaaaaggaaccgtgagtgaaatatttaacctgattgtggat
agagaaaatttgaaagcgctcatacttattgtgcagagtaagatgacttccttcgcgcgc
aaagatttggagacctgcccatttaaagttgagatatttagaataactgatttgctggtc
aatattacaaagcatgtgctgcagccaaagcatgaggtactgactgatgatgaaaagaaa
gcactgctcaccaagtatagtttggaagataaacagctgcctttgattttaaaaactgat
gccatagctcgctactacgggtacgagaaaggtcaggttattaagatcactcacagtgga
ccgttgattgaatcttatgtatcataccgctgtgtcgtgtaa

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