KEGG   Castor canadensis (American beaver): 109680707
Entry
109680707         CDS       T04791                                 
Symbol
Apobec1
Name
(RefSeq) C->U-editing enzyme APOBEC-1
  KO
K16932  C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
Organism
ccan  Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccan03019]
    109680707 (Apobec1)
Enzymes [BR:ccan01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.36  mRNA(cytosine6666) deaminase
     109680707 (Apobec1)
Messenger RNA biogenesis [BR:ccan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    APOBEC1-ACF complex
     109680707 (Apobec1)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109680707 (Apobec1)
SSDB
Motif
Pfam: APOBEC4_like APOBEC1 SNAD4 NAD1 APOBEC_N APOBEC2 NAD2 APOBEC4 APOBEC3 APOBEC_C dCMP_cyt_deam_1 Toxin-deaminase Bd3614-deam
Other DBs
NCBI-GeneID: 109680707
NCBI-ProteinID: XP_020011013
UniProt: A0A8B7TTY2
Position
Unknown
AA seq 236 aa
MASETGPSAGDPTLRRRIEPWEFEVFFDPRELRRETCLLYEIQWGTSHRRWRKSGKNTTN
HAEVNFIEKLTSERQFCPSVRCSITWFLSWSPCWECSQAIQEFLSQHPNVTLVIYVARLY
YHMDQRNRQGLRDLVNSGVTIQIMSVPEYCYCWRNFVNFPPGQEAHWPRYQPQWMALYEL
ELHCIILSLPPCLKISRRCQKQLTFFGLTLQNCHYQAIPPHILLATGLVLPFVPWR
NT seq 711 nt   +upstreamnt  +downstreamnt
atggcttctgagacaggtccttcagctggtgaccccactctgaggagaagaatcgaaccc
tgggaatttgaagtcttctttgatccccgggaactgcgtagagagacctgtctgctctat
gaaatccagtggggtaccagccacaggaggtggcggaaatcaggcaagaacaccaccaat
cacgctgaagttaatttcatagaaaaactgacttcagaaagacagttttgcccgtctgtc
agatgctccatcacctggttcctgtcctggagtccctgctgggaatgctcccaggctatt
caagaatttctgagtcaacaccctaatgtgactctggtgatttatgtagctcggctttat
taccatatggatcagaggaacaggcaaggactcagagacctcgttaacagtggagtgacc
atccagatcatgagtgtcccagagtattgttactgctggaggaattttgtcaacttccca
cctgggcaggaagcgcactggccgagataccagcctcagtggatggcactgtacgagctg
gagctgcactgcatcatcctgagtcttccaccctgtttaaaaatttcaagaagatgtcaa
aaacagcttacattttttggacttactcttcaaaattgccattaccaagcaattccacct
cacatccttttagctacagggttggtactaccttttgtgccttggagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (37)   

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