KEGG   Castor canadensis (American beaver): 109682143
Entry
109682143         CDS       T04791                                 
Symbol
Srf
Name
(RefSeq) serum response factor isoform X1
  KO
K04378  serum response factor
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan04010  MAPK signaling pathway
ccan04022  cGMP-PKG signaling pathway
ccan05166  Human T-cell leukemia virus 1 infection
ccan05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    109682143 (Srf)
   04022 cGMP-PKG signaling pathway
    109682143 (Srf)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    109682143 (Srf)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    109682143 (Srf)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccan03000]
    109682143 (Srf)
Transcription factors [BR:ccan03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box responders to external signals
    109682143 (Srf)
SSDB
Motif
Pfam: SRF-TF
Other DBs
NCBI-GeneID: 109682143
NCBI-ProteinID: XP_020012827
UniProt: A0A8C0WS24
Position
Unknown
AA seq 511 aa
MLPSQAGAAAALGRGSALGGSLNRTPTGRPGSGGGSGGTRGANGGRVPGNGAGLGPGRLE
REAAAAAATTPAPTAGALYSGSEGDSESGEEEELGAERRGLKRSLSEMELGVVVGGPEAS
AAATGGYGPVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELST
LTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMS
ATGFEETDLTYQVSESDSSGETKDTLKPAFTVTNLPGTTSTIQTAPSTSTTMQASSGPSF
PITNYLAPVSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLPTSFTLMPGGAVAQQVPV
QAIQVHQAPQQASPSRDSSTDLTQTSSSGTVTLPATIMTSSVPTTVGGHMMYPSPHAVMY
APTSGLADGSLTVLNAFSQAPSTMQVSHSQVQEQGGVPQVFLTAPSGTVQIPVSAVQLHQ
MAVIGQQAGSSSNLTELQVVNLDATHSTKSE
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgttaccgagccaagctggggccgcggcggctctgggccggggctcggccctggggggc
agcctgaaccggaccccgacggggcggccgggcagtggaggcggcagcggcgggactcgc
ggggctaacgggggccgggtccctgggaacggcgcggggctcggaccgggccgcctcgag
cgggaggctgcagcagcggcagcaaccaccccggcgcccaccgcgggggccctctacagc
ggcagcgagggcgactcggagtcgggcgaggaggaggagctgggcgcggagcggcgcggc
ctgaagaggagcctgagcgagatggagcttggcgtggtggtcggtgggcccgaggcgtcg
gcggcggccaccgggggctacgggccggtgagcggcgcggtgagcggggccaagccgggt
aagaagacccggggccgcgtgaagatcaagatggagtttatcgacaacaagctgcggcgc
tacacgaccttcagcaagaggaagacgggcatcatgaagaaggcctatgagctgtccacg
ctgacagggacacaggtgctgttgctggtggccagtgagacaggccatgtgtataccttt
gccacccgcaaactgcagcccatgatcaccagtgagaccggcaaggcactgattcagacc
tgcctcaactcgccagactctccaccccgctcagaccccaccacagaccagagaatgagt
gccactggctttgaagagacagatctcacctaccaggtgtcagagtctgacagcagtggg
gagaccaaggacacactgaagccggcattcacggtcaccaacctgccaggtaccacctcc
accatccagacagcacctagcacctctaccaccatgcaagccagtagcggcccctccttt
cccatcaccaactacctggcaccagtgtctgctagtgtcagccccagcgctgtcagcagt
gccaacgggactgtgctgaagagtacaggcagtggtcctgtctcctctggaggccttatg
cagctgcccaccagcttcaccctcatgcctggtggggcagtggcccagcaggtccctgtg
caggccattcaggtgcaccaggccccacagcaagcgtctccctctcgtgacagcagcaca
gacctcacgcagacctcctccagcgggacagtgacgttgcctgccaccatcatgacgtca
tccgtgcccacaactgtgggtggtcacatgatgtaccctagcccccatgcggtgatgtat
gcccccacctcaggcctggctgatggcagcctcaccgtgctcaatgccttctctcaggca
ccatctaccatgcaggtgtcccacagccaggtccaggagcaaggtggcgtcccccaggtt
ttcttgactgcaccatctgggacagtgcagattcctgtttctgcagttcagcttcaccag
atggctgtgatagggcagcaggctgggagcagcagcaacctcaccgagctacaggtggtg
aacctggacgccacccacagcaccaagagtgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

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