KEGG   Castor canadensis (American beaver): 109686675
Entry
109686675         CDS       T04791                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM alpha chain isoform X1
  KO
K06752  MHC class II antigen
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan04145  Phagosome
ccan04514  Cell adhesion molecules
ccan04612  Antigen processing and presentation
ccan04640  Hematopoietic cell lineage
ccan04658  Th1 and Th2 cell differentiation
ccan04659  Th17 cell differentiation
ccan04672  Intestinal immune network for IgA production
ccan04940  Type I diabetes mellitus
ccan05140  Leishmaniasis
ccan05145  Toxoplasmosis
ccan05150  Staphylococcus aureus infection
ccan05152  Tuberculosis
ccan05164  Influenza A
ccan05166  Human T-cell leukemia virus 1 infection
ccan05168  Herpes simplex virus 1 infection
ccan05169  Epstein-Barr virus infection
ccan05310  Asthma
ccan05320  Autoimmune thyroid disease
ccan05321  Inflammatory bowel disease
ccan05322  Systemic lupus erythematosus
ccan05323  Rheumatoid arthritis
ccan05330  Allograft rejection
ccan05332  Graft-versus-host disease
ccan05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    109686675
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109686675
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    109686675
   04612 Antigen processing and presentation
    109686675
   04658 Th1 and Th2 cell differentiation
    109686675
   04659 Th17 cell differentiation
    109686675
   04672 Intestinal immune network for IgA production
    109686675
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    109686675
   05164 Influenza A
    109686675
   05168 Herpes simplex virus 1 infection
    109686675
   05169 Epstein-Barr virus infection
    109686675
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    109686675
   05152 Tuberculosis
    109686675
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    109686675
   05140 Leishmaniasis
    109686675
  09163 Immune disease
   05310 Asthma
    109686675
   05322 Systemic lupus erythematosus
    109686675
   05323 Rheumatoid arthritis
    109686675
   05320 Autoimmune thyroid disease
    109686675
   05321 Inflammatory bowel disease
    109686675
   05330 Allograft rejection
    109686675
   05332 Graft-versus-host disease
    109686675
  09166 Cardiovascular disease
   05416 Viral myocarditis
    109686675
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    109686675
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccan04147]
    109686675
Exosome [BR:ccan04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109686675
  Exosomal proteins of epithelial cells
   109686675
  Exosomal proteins of breast milk
   109686675
SSDB
Motif
Pfam: MHC_II_alpha C1-set FAST_1 HTH_63 SLC3A2_N
Other DBs
NCBI-GeneID: 109686675
NCBI-ProteinID: XP_020019705
UniProt: A0A250YDV1
Position
Unknown
AA seq 260 aa
MDHERNQGVALQLLQLLWLLPHSWGIPAAPAPVWWDDLQNHTFRHTMFCQDGSPSIGLSE
SYGEDQLFSFNFSQNMRVPRLPEFADWAQEHGDSLAISFDKEFCEIMIQEIGPELDGKIP
VSRGFPVAEVFTMKPLEFGKPNTLVCFISNLFPPTLTVNWQHHSVPVEGVGPTFVSAIDG
LIFHAFSYLNFTPEPSDVFSCIVTHEIDRYTAIAFWVPQNAIPSDLLENVLCGVAFGLGV
LGIIVGAVLIIYFRKPCSGD
NT seq 783 nt   +upstreamnt  +downstreamnt
atggatcatgagcggaaccaaggagttgcgctgcagctgctacagcttctgtggctgctg
ccccactcctggggaattcctgcagctcctgctcctgtgtggtgggatgacctgcaaaac
cacacattccggcatactatgttctgccaagatgggagtcccagcatagggctctctgag
agttatggcgaggaccagcttttctccttcaacttttcccagaacatgcgagtgcctcgt
ctgcctgaatttgccgactgggctcaggaacacggagactcccttgccatttcatttgac
aaagagttttgtgaaataatgatccaggaaataggcccagaacttgatgggaagattcca
gtgtccagaggtttccctgtcgctgaggtattcacaatgaagcccctggagtttggcaag
cccaatacgctggtctgctttatcagtaatctcttcccaccgactttgacagtaaactgg
cagcatcattctgtccctgtggaaggagttgggcccacttttgtatcagccatcgatgga
ctcatcttccacgccttttcttatttaaacttcacaccagaaccctctgatgttttctcc
tgcatcgtaactcatgaaattgaccgctacacagcaattgcattttgggtgccccagaac
gccattccctcagacctcctggagaatgtgttgtgtggtgtagcctttggcttgggtgta
ctgggcatcattgtgggcgctgttctcatcatctacttccgaaaaccttgctcaggtgac
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (24)   
   KEGG PATHWAY (24)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (47)   

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