KEGG   Castor canadensis (American beaver): 109689669
Entry
109689669         CDS       T04791                                 
Symbol
Usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
ccan  Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ccan01002]
    109689669 (Usp13)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccan04121]
    109689669 (Usp13)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccan04147]
    109689669 (Usp13)
Enzymes [BR:ccan01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     109689669 (Usp13)
Peptidases and inhibitors [BR:ccan01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   109689669 (Usp13)
Ubiquitin system [BR:ccan04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    109689669 (Usp13)
Exosome [BR:ccan04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109689669 (Usp13)
SSDB
Motif
Pfam: UCH zf-UBP_var UBA zf-UBP UCH_1 UBA_4 UBA_3 HYPK_UBA
Other DBs
NCBI-GeneID: 109689669
NCBI-ProteinID: XP_020024206
UniProt: A0A250Y5P2
Position
Unknown
AA seq 863 aa
MQRRGALFSMPGGSGSRKMAAGDIGELLVPHMPTIRVPRSGDRVYKSECAFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHMREKVRGASGGALPKRRNSKIFLDL
DTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSILCGKWFFDSSG
GNGHALEHYRDMGYPLAVKLGTITPDGADVYSFQEEEPVLDPHLAKHLAHFGIDMLHMHG
TENGLRDNDIKPRVSEWEVIQESGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEF
QRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQ
QNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEER
IQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLPELVRAKIP
FSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFD
VSIDMPDLLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQ
LAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGGAASSGASVFG
ATGLDNQPPEEIVAIITSMGFQRNQAVQALRATNNNLERALDWIFSHPEFEEDSDFVIEM
ENNANANIISEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDH
KVCASERPPKDLGYMYFYRRIPS
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgcagcgccggggcgccctgttcagcatgccgggcggcagcggcagcaggaagatggct
gcaggagacatcggcgaactgctggtgccccacatgcccacgatccgcgtgcccaggtcc
ggggacagggtctacaagagcgagtgcgccttctcctacgactcccccaactcggaaggt
ggactctatgtatgcatgaatacatttttggcctttggaagggaacatgttgaaagacat
tttcgaaaaactggacagagtgtgtacatgcacctgaaaagacatatgcgagagaaagta
agaggggcatctggtggagctttaccaaaaaggaggaattccaagatttttttagatcta
gatactgatgatgatttaaatagcgacgattatgaatatgaagatgaagccaaacttgtt
atattcccagaccactatgagatagcactaccaaatattgaggagttaccagccctggta
acaattgcttgtgatgcagttctcagctcaaaatccccatacagaaaacaggatccagac
acatgggaaaatgaattgccagtgtctaaatatgccaacaacctcacccaactggataat
ggagtcaggattcctcccagtggttggaaatgtgccaggtgtgacctgagggagaacctc
tggttgaatctgactgatggctctatcctgtgtgggaagtggttctttgacagctccggt
ggcaacgggcatgctctagagcattacagagacatgggctaccctctggctgtgaagctg
ggaaccatcactcctgatggggcagatgtttattcttttcaagaagaggaacctgttctg
gaccctcatctggcgaagcatttagcgcattttggaattgatatgcttcacatgcatggg
acagagaatgggctccgggacaatgacatcaagccgagggttagtgagtgggaagtgatc
caggagtcggggacgaagctaaagcctatgtatggccctgggtacacaggcctgaagaac
ctgggcaacagctgctatctcagttctgtcatgcaggccattttcagcatcccagagttc
cagagagcgtatgtaggaaaccttccaagaatatttgactactcgcctttagatccaaca
caagatttcaacacacagatgactaagttaggacatggccttctttcaggccagtattca
aagcctccggtgaaatctgagctcattgagcaggtgatgaaggaggagcacaagcctcag
cagaatgggatctctccacgtatgtttaaggcctttgtcagcaagagccacccggaattc
tcctccaacagacagcaagatgctcaggagtttttcttgcatttggtgaatctcgtagag
aggaaccgcattggctcagaaaacccaagtgacgtttttcgatttttggtggaagagcgt
attcaatgctgtcagactcgaaaagtccgatatacagagagggtggattacctgatgcag
ttacctgtggccatggaggcagcaaccaacaaagatgagctgattgcctatgaattaacg
agaagggaagcagaagccaaccgaagacctcttcctgagttggtgcgtgccaagatacca
tttagtgcttgccttcaggccttttctgaaccagaaaacgttgacgatttctggagcagc
gccctccaagccaagtctgcgggtgtgaaaacatctcgatttgcctcattccctgaatac
ttggtagtgcaaataaagaagttcacttttggtcttgactgggttcccaaaaaatttgat
gtgtctattgatatgccagacctacttgatatcaaccatcttcgagccaggggattacag
ccgggagaggaggaacttccagacatcagtccccccatcgtcattcctgatgactcaaaa
gatcgtctgatgaaccaattgatagacccctcagacattgatgagtcgtcagtgatgcag
ctggccgagatgggcttccctctagaagcatgtcggaaggccgtgtactttactggaaac
atgggagctgaggtagccttcaactggatcattgttcacatggaagagccagattttgct
gaaccactgaccatgcctggttatggaggagcagcatcttctggagcctctgtatttggt
gctactggattggataaccaacctccagaggaaattgtagctattatcacctccatggga
ttccagcgaaatcaagctgtgcaagcattacgagcaacgaataataacctggaaagagca
ctggattggatctttagccaccctgagtttgaagaggacagtgactttgtgattgagatg
gagaataacgccaatgcaaacatcatttctgaggccaagcctgaaggacctagagtaaag
gatggatctggaatgtatgaattatttgcatttatcagtcacatgggaacatctacaatg
agtggccattatgtttgccatatcaaaaaggaaggaagatgggtgatctacaatgaccac
aaggtttgtgcctcagaaaggcctcctaaagacctgggctacatgtatttttaccgcagg
ataccaagctaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (29)   

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