KEGG   Castor canadensis (American beaver): 109691227
Entry
109691227         CDS       T04791                                 
Symbol
Thoc3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan03013  Nucleocytoplasmic transport
ccan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109691227 (Thoc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    109691227 (Thoc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccan03019]
    109691227 (Thoc3)
   03041 Spliceosome [BR:ccan03041]
    109691227 (Thoc3)
Messenger RNA biogenesis [BR:ccan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109691227 (Thoc3)
Spliceosome [BR:ccan03041]
 Complex C
  Other components
   EJC/TREX
    109691227 (Thoc3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109691227 (Thoc3)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A RMC1_N NBCH_WD40 PD40 Coatomer_WDAD Nup160 Peptidase_S9_N Cytochrom_D1 DPPIV_N IKI3 DUF359
Other DBs
NCBI-GeneID: 109691227
NCBI-ProteinID: XP_020026669
UniProt: A0A250YGA3
Position
Unknown
AA seq 351 aa
MAVPTAVVGPSALGQSGPGSLAPWCSVSSGPSRYVLGMQELFRGHSKTREFPAHSAKVHS
VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG
DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ
FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA
TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK
LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcagtccctacggcagttgtcgggccttcggctctgggccagagcggtccaggttcg
ctggctccttggtgctccgtgagcagcggcccatcgcgctacgtgctcgggatgcaggaa
ctgttccgaggccacagcaagacgcgcgagtttccggcgcacagtgccaaggtgcattct
gtggcctggagctgcgacgggcgtcgcttagcctcgggatcctttgacaagacggccagc
gtcttcttactggagaaggaccggttggtcaaagaaaacaactatcggggacatggggac
agtgtggaccagctttgttggcatccaagtaatcctgatctcttcgtcactgcatctgga
gataaaaccattcgcatctgggatgtgaggaccacaaaatgcattgccaccgtgaacact
aaaggggagaacattaatatctgttggagtcctgatgggcagaccattgctgtgggcaac
aaggatgatgtggtgacctttattgacgccaagacacaccgttccaaagcagaggagcag
ttcaagtttgaggtcaacgaaatctcctggaacaatgataataacatgttcttcctcaca
aatggcaatggttgtatcaacatcctcagctatccagaactgaagcctgtgcagtccatc
aatgcccatccttccaactgcatctgtatcaagtttgaccccatggggaagtattttgct
actgggagtgcagatgcattggtcagcctctgggatgtggatgagttggtgtgtgtaagg
tgcttttccaggctggattggcctgtgaggaccctcagttttagccatgatgggaagatg
ctggcgtcagcgtctgaagatcatttcatagacatagctgaagtagagacaggagacaag
ctatgggaggtgcagtgtgagtccccgaccttcaccgtggcatggcaccccaaaaggcct
ctgctggcatttgcctgtgatgacaaagatggcaaatacgacagcagccgggaagctggg
actgtgaagctctttgggcttcccaatgactcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (33)   

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