KEGG   Castor canadensis (American beaver): 109694153
Entry
109694153         CDS       T04791                                 
Symbol
Rnf8
Name
(RefSeq) E3 ubiquitin-protein ligase RNF8 isoform X1
  KO
K10667  E3 ubiquitin-protein ligase RNF8 [EC:2.3.2.27]
Organism
ccan  Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccan04121]
    109694153 (Rnf8)
   03400 DNA repair and recombination proteins [BR:ccan03400]
    109694153 (Rnf8)
Enzymes [BR:ccan01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109694153 (Rnf8)
Ubiquitin system [BR:ccan04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109694153 (Rnf8)
DNA repair and recombination proteins [BR:ccan03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     109694153 (Rnf8)
SSDB
Motif
Pfam: FHA zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-rbx1 zf-RING_UBOX zf-C3HC4_4 zf-RING_5 Yop-YscD_cpl Prok-RING_4 zf-RING_10 zf-RING_6 zf-ANAPC11 DUF6594 IRS Golgin_A5
Other DBs
NCBI-GeneID: 109694153
NCBI-ProteinID: XP_020031504
UniProt: A0A8B7VK52
Position
Unknown
AA seq 513 aa
MGEPGPLVPGGLAGGRRWCLRRVGMNAEWLLLEDGREVTIGRGLGVTYQLVSKICPLMIS
RNHCVLKQNPEGQWTIVDNKSLNGVWLNKERLQPLQVYLLHKGDHIQLGVPLENKENAEY
EYEVTEEDWESVYPCLAPKNDQMLEKNKGLRTKRKFSLDELEGLGAEGPSNLKSKISKVS
CEPGQSVKVHGESGVAGQPLQCLYPESTPLEDTEKTMGAHNHPGAPKVRQLHHKKQKASN
PSAPQSSLELFKVTMTRILKLKTQMQEKQVAVLNVKRQTQKGNLKKIRKMEQELQDLQSQ
LCAEQAQQQARVEQLERTLQEEEHHLQGLEKNQEEDLKQQLAQALQEHQALMEELSRSKK
DFETIIQAKNRELERTKEEKEKMQAQKEEVLSHVNDVLENELQCIICSEYFIEAVTLNCA
HSFCSYCIGEWMKRKVECPICRKDIESKTHSLVLDNCIDKMVDNLSSEVKERRIVLIRER
KESLKGALGEWRQGFWQTEPTQREYLLKAKSLS
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgggggagcctggcccgttggtcccgggaggcctcgccggcggccggcgctggtgcttg
cgccgggtggggatgaacgccgagtggctgctgctggaggacgggcgcgaggtgactata
ggacgaggacttggtgtcacataccaactggtatcaaaaatctgccctctaatgatttcc
cgaaaccactgtgttttgaagcagaatcctgagggccagtggacgattgtggacaataag
agtctgaatggtgtttggctgaacaaagaacgcttgcaaccattacaggtttacttactc
cataagggagaccacatccagctcggagtgccactggaaaataaggagaatgcggaatat
gaatatgaagttactgaagaagactgggagagtgtttatccctgcctcgccccaaagaat
gaccagatgctcgaaaaaaataagggcttgagaactaaacggaaatttagtttagatgaa
ttagagggtcttggcgctgaaggcccctcaaatttgaaatccaaaataagtaaagtgtct
tgtgagcctggccagtcagtgaaggtgcatggggagagtggagtggcaggccagcccttg
cagtgtttgtatccggagtcaactcctcttgaggacactgagaagaccatgggggctcat
aatcaccctggcgccccaaaagtcagacagcttcaccataagaagcagaaagcctcgaac
ccttcagcacctcagagcagcttagagctgtttaaggtgaccatgactaggattctgaag
ctgaaaacacagatgcaggaaaaacaagtagctgttctgaacgtgaaaaggcaaacacaa
aaggggaacttaaagaaaattaggaaaatggagcaggaactgcaggatttacagtcccag
ctgtgtgcagagcaggctcagcagcaggccagagtggagcagctagagaggactttgcag
gaagaggaacatcatctccagggtttggagaaaaaccaagaggaggacctgaagcaacag
ttggcacaggctctgcaggagcaccaggctctcatggaagagctaagtcgcagcaagaag
gactttgaaacaatcattcaagccaagaacagagaactggagcggaccaaggaagaaaag
gaaaagatgcaggcacagaaggaagaagttcttagccacgtgaatgatgtgctggagaat
gaactccaatgtattatttgctcagaatacttcattgaagctgtcaccttgaactgtgcc
cacagtttctgctcctactgtatcggggaatggatgaagcggaaggtagaatgccccatt
tgtcggaaggacattgagtccaaaacccactccctggttctggacaattgcattgataaa
atggtggataatctcagctcagaggtgaaagaacgacgaatcgtccttataagggaacga
aaagagtctttgaaaggagcgttgggggaatggcggcaaggtttctggcagaccgaaccc
acccagagagaatacttgttgaaagcaaagagtctgtcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (17)   
   Pfam (17)   
All databases (61)   

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