KEGG   Cyprinus carpio (common carp): 109062873
Entry
109062873         CDS       T05134                                 
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like
  KO
K10630  RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:2.3.2.31]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04217  Necroptosis
ccar04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    109062873
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    109062873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccar04121]
    109062873
Enzymes [BR:ccar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     109062873
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    109062873
  Multi subunit Ring-finger type E3
   LUBAC complex
    109062873
SSDB
Motif
Pfam: zf-RanBP IBR ubiquitin zf-RING_2 zf-RING_5 zf-RING_UBOX zf-C3HC4 Helicase_PWI
Other DBs
NCBI-GeneID: 109062873
NCBI-ProteinID: XP_018935496
Position
6:18562772..18569138
AA seq 489 aa
MLSDAINSRDKDEASKYLDQLLDLKLPVCVKINPEAYSKDNIRLRVGVADAVSDAHIPIT
VIVPVYMTISELKEKINRDYGFHPALQRWVIGKRLAQDRETLYHYGVRNHDDTAFLFILS
TQAANLSREQERKEKEDRRIDDIIEVIDRPPQRPPELIARGANPPPLPPKPQPVGWSCPG
CTFVNKPTRPGCEMCSTARPENYEVPDIYQPDETETRRLQQEELASLQYEQSMKDERERN
FQELLETDSHSLVGNVEELDCAICFCTIMPGEGAVLRECLHSFCRECLKETVLNCTDAEV
ACPYRDNAYSCNCKLQDREIRSLLSQDEYQKFLELRLNIAESRSENSYHCKTPDCAGWCI
FEDDVNEFTCDICNETNCLLCKAIHKGMNCKEYQDDLRIRAQNDDAALQTTQMLDQLLKN
GEAMNCPKCQVIVQKKDGCDWICCLMCKTEICWVTKQARWGPQGAGDTSGGCKCRVNGVL
CHPRCQNCH
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgttgagcgatgccatcaactctagagacaaagatgaagcgagcaaatacctggatcaa
cttttggatctaaaactcccagtgtgtgtcaaaataaatcctgaagcatactctaaagac
aacatcaggttgagagtaggagtggcggacgccgtgtcagacgcccacatcccaataaca
gtgattgtaccagtttacatgacaatatcagagctgaaagaaaagatcaatcgtgactat
ggcttccatccggccctccagcgctgggtgatcgggaagcgcctcgcccaggacagagaa
accctgtatcattatggggtcagaaaccatgatgatacagccttcctctttatcctttcc
acccaggctgccaatctgagccgcgaacaagagagaaaagagaaagaggatagacggatt
gatgatataattgaggtcattgatcgtccacctcaacggccaccagagctcatcgccaga
ggagctaatccccctcctctacctcccaaacctcagccagttggttggtcatgtcctggc
tgcacatttgtgaataaaccaacacgtccaggttgtgagatgtgcagcacagcaagacct
gagaactatgaagtacctgacatataccagcccgatgagacggaaaccaggagactccag
caggaggaactcgccagcctgcagtatgagcagtctatgaaggatgaacgggagaggaat
ttccaagaactccttgaaacggattcccacagtctggtggggaacgtggaagagctggat
tgtgccatctgcttttgcaccatcatgccaggagagggcgctgtgctgagagagtgcctg
catagcttctgcagggaatgtctgaaggaaacagttctgaactgcacggatgctgaggtg
gcttgtccttacagagacaatgcttattcctgtaactgcaaacttcaagatcgagaaatc
agatcacttctctcccaggacgagtaccagaagtttctagaactgaggctgaacatcgca
gagtcccgcagtgagaacagttaccactgcaagacccccgactgcgctggctggtgcatc
ttcgaagatgacgtgaacgaattcacatgtgacatttgcaacgagaccaactgtctcctc
tgcaaggctattcacaaaggtatgaactgcaaggagtaccaggatgacctccgtattcga
gcgcagaatgacgacgcagccctgcagaccacacagatgctggatcaactcctgaagaac
ggcgaggcgatgaactgtcccaaatgtcaggtgatcgtccagaagaaagacggctgtgac
tggatctgctgtctgatgtgcaagaccgagatctgctgggtgactaaacaagcccggtgg
ggacctcagggtgctggagacacatcaggcggatgcaaatgtcgagtcaacggagtcctt
tgccatccgcgctgtcagaactgccactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

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