KEGG   Cyprinus carpio (common carp): 109088331
Entry
109088331         CDS       T05134                                 
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
  KO
K20099  ATP-dependent RNA helicase YTHDC2 [EC:5.6.2.6]
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccar03041]
    109088331
Enzymes [BR:ccar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     109088331
Spliceosome [BR:ccar03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    109088331
SSDB
Motif
Pfam: HA2_C HA2_N Ank_2 OB_NTP_bind Ank_4 Ank_5
Other DBs
NCBI-GeneID: 109088331
NCBI-ProteinID: XP_018958034
Position
Unknown
AA seq 815 aa
MSGDEALSTVTHVIVDEVHERDGLTDFLLTKMKELVQKTPSLKLILSSAALDVNLFVRYF
GACPVIHIKGCPYEVKQLFLEDILRTTGYINKDMMKYKKEAQREERQQTSLTEWCDARLD
VLQPEAPREKTHACVLQENDLLDDGGDSVFSQMSEKDVATLEPWLLREMDACISNIFLNQ
DADAFVQLFNLILNENISVDYRHSETSVTPLMVSAGRGFLSQMEQLLSMGANANIKASNG
WTALDWARHFNQTEAVDLLESHIWCVEAGQLDEASLVQTAASELNPEDQELLKAYHHSFD
DEKVDLDLILHLLFTIYQSSDEGAVLIFLPGYDEIVSLRDRILFDDKRFTDHQQRSVSRS
CVVLQKAYDALSNVTMLKMVWISKASALQRKGRAGRCRPGICFHLFSRLRFNNMLEHQVP
QLLRMPLQELCLHTKLLAPITCPIAEFLSKAPEPPHLHTVKHAVQMLKTIDAMDPWENLT
ELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAHRDPFVLPAQAAQKRAAMLCR
KRFTANTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIVGMRTQLLGQLRA
TGEIFSDFPVHVLQSNPPANGQAAAVDSLPTDWLIYDEMTRAHRIASVRCCSVVTPLTVA
IFAGSAKLPSSALQEPAIHRGADGENDSSDSEVEDRSSSRLAHISIDDWLHFKLHRETAE
QVFGLRQRWQSLFLRRIRSPSKSCSQLDEATIRSLVSVLLAEEQSAGLQQPTGIGQRPRP
MTSDDPPQTPAGRSAAEQERSSPDRCTTLTLTANT
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgtccggagacgaagccctgtccaccgtcacgcatgtcatcgtggacgaggtgcacgag
cgagacggcctgaccgacttcttactcacgaagatgaaggagctggtccagaagacgccg
tcgctgaagctcatcctgtccagcgccgctctggacgtcaatctgtttgtcagatacttc
ggagcctgtcctgtcattcacatcaaaggttgtccatacgaggtcaagcagctctttctg
gaggacatcctgcggaccaccggatacatcaacaaagacatgatgaagtacaagaaggag
gcgcagagagaggagaggcagcagacgtctctcacagagtggtgtgacgctcgtctggac
gtcttacagccggaggctccgagggagaagacgcacgcttgtgtcctgcaggagaacgac
ctgctagacgacggcggcgacagtgtcttcagtcagatgagcgagaaggacgtggccaca
ctggagccctggctgctcagagaaatggacgcctgcatctccaacatcttcctgaaccaa
gacgccgatgccttcgtgcagctcttcaatctgatcctgaacgagaacatcagcgtggat
tacagacacagcgagacgagtgtcacgccgctgatggtgtccgccggacgaggttttctc
agtcagatggagcagctcctcagtatgggtgcgaacgccaacatcaaagcctccaacggc
tggacggctctggactgggccagacacttcaatcaaactgaggctgtagatctgctggag
tctcacatatggtgtgttgaagcaggtcagctggacgaggcgtctctggttcagacggca
gcatccgagctgaatcctgaggaccaggagctgctcaaagcgtatcatcacagcttcgac
gatgagaaggtcgacctggatctcatcctgcacctgctcttcaccatctaccagagctct
gacgagggcgcagtgttgatattcctgccgggctacgatgagattgtgtctctgagagac
cgcatcctctttgatgataaaaggtttacagatcaccagcaaaggtctgtgagtcgttct
tgtgttgtgctgcagaaagcctatgacgctctgagtaacgtgaccatgctgaagatggtg
tggatatcgaaggccagcgctctgcagaggaagggcagagcgggccgctgcagaccgggc
atctgtttccatctcttcagccgtctgaggttcaacaacatgctggagcatcaggttcct
cagctgctgcgcatgccgctacaggagctgtgtctgcacactaaactgctggcgcccatc
acctgtccgatcgctgagttcctgtctaaagcaccggagccgcctcacctgcacacggtc
aaacacgccgtacagatgctgaagaccatcgacgccatggacccctgggagaacctgacg
gagctgggctatcacctcgctgacctgcccgtggagccacatttagggaagatggttctg
tgtgcggtggtgctgaagtgtttggaccccatcctcaccatcgcctgcacactcgctcac
agagaccccttcgttcttcccgctcaagccgctcagaagcgcgccgccatgctgtgcagg
aaacgcttcaccgccaacaccttcagcgaccacatggctctgctccgcgcctttcaggcc
tggcagaaggctcgcagtgatggctgggaaagagccttctgcgagaagaacttcctctct
caggccaccatggagatcatcgtcgggatgcgaacgcagcttttgggacagcttcgagct
acaggtgagattttctcagattttccagttcatgttctccaaagcaatcctccagccaat
ggtcaggcggcagccgtggactccctgcccactgattggctgatttatgatgagatgacc
cgcgctcacaggatcgccagtgtccggtgctgctctgtggtcacacccctcaccgtcgcc
atcttcgcaggaagtgccaaactgcccagctccgccctgcaggagcccgccatccacaga
ggagctgatggtgagaatgacagcagtgatagtgaggtggaggatcgctccagctctcgt
ctggctcacatcagcatcgatgactggctccacttcaaactccaccgagagacggcggag
caggtgttcggtctgaggcagcgctggcagagtctgttcctgcggaggatccgctctccg
tcgaagtcctgctctcagctggacgaggccaccatccgctcgctggtgtcggttctgttg
gccgaggagcagagcgccggcctccagcagcccaccggcatcggccagagacctcgacct
atgacctccgacgatcccccgcagacgccagccggccggagcgcagcggagcaggagcgc
agcagcccagacaggtgcaccacactcacacttacagctaacacttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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