KEGG   Cyprinus carpio (common carp): 109091792
Entry
109091792         CDS       T05134                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 2B-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    109091792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccar03000]
    109091792
   04121 Ubiquitin system [BR:ccar04121]
    109091792
   03036 Chromosome and associated proteins [BR:ccar03036]
    109091792
Enzymes [BR:ccar01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     109091792
Transcription factors [BR:ccar03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    109091792
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     109091792
Chromosome and associated proteins [BR:ccar03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109091792
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     109091792
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like F-box LRR_4
Other DBs
NCBI-GeneID: 109091792
NCBI-ProteinID: XP_018961121
Position
11:complement(17387186..17392938)
AA seq 492 aa
MGSSPSAAPGSTAGGVKLSSSRGSSSARRRRTRCRKCEACTRKECGECHFCKDMKKFGGP
GRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVENEEDKFNMMLMECSVCNEIIHPGC
LKEKDSGGVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASMREQVPVNWIRTTPTPVI
RPTPCRSPPKCVQMERHVIRPPPISPPPDGLPLDDGKNHVMRREVWMAVFSHLTHQDLCV
CMRVCKTWNRWCCDKRLWTKIDLNRCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWL
INRLPGLRILLLAGCSWAAVSALCTSSCPLLRTLDVQWVEGLNDNQIRDLLSPPTDNRPG
QLDSRSKLRNVENLYLAGLDITDTSLKLIIKHIPSLSQLDLSYCNHITDQSVNILTAAGT
TTRDSLTHINLSVCNKVTDLSLTYFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQF
RLIEEKLLRKLS
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgggctcatctccatcggctgctccaggctcgacagcaggaggagtgaagctctcgtcc
agtcgcggttcatctagtgcccggcgcagacggacacgctgcaggaagtgcgaggcatgt
acgcgcaaagagtgtggcgagtgccacttctgcaaagacatgaagaagtttggtggacca
ggccgcatgaagcagtcctgtatcatgagacagtgcatagcgcctgttctgcctcacact
gctgtgtgtctggtttgcggagaggctgggaaagaagacacagtagagaatgaggaggac
aagttcaacatgatgcttatggagtgctctgtctgcaacgaaatcatccatcctggatgc
ttgaaggagaaggattctggcggtgttgtaaatgatgagttgccaaattgctgggagtgt
ccgaaatgcaatcatgctggaaagactgggaaacaaaaaagaggcccagggtttaagtac
gcctctatgcgagaacaggtcccggttaactggatcaggactacacctacccctgtcatt
cgcccaacaccttgccgctctccaccgaaatgtgttcagatggagcgtcacgtaattcgc
ccccctccgatcagcccccctccggatgggctgcccctagatgacgggaagaatcacgtc
atgcggagagaggtgtggatggcagtgttcagccacctcacacaccaagacctctgtgtc
tgcatgcgggtctgcaagacctggaacagatggtgttgtgataaaagactgtggaccaag
atcgatctgaaccggtgcaagtcaatcactccactaatgctgagtggcattatccgcaga
caaccggtctccctggacctgagttggaccaacatctctaagaagcagctcagctggcta
atcaacagattacctggtctgaggattctgttgctggcaggctgttcgtgggcagctgta
tcagctttatgcacatccagctgtcctttgctaagaactttagatgtgcagtgggtagag
ggactcaacgacaaccagataagagacttgctctccccgccgacagacaacaggccaggt
cagttggacagcagaagtaaactaagaaacgtggagaatctctatctagctggactggac
atcacagatacgtccctgaagctgatcataaaacatataccttcactgtcccaattggac
cttagttactgtaaccacatcaccgaccagagtgtgaatatcctcacggcagccggcacc
acgaccagagactctcttactcacatcaacctttcagtttgtaacaaagttacagacctg
tcgttgacctacttcaagcgctgcggaaacatttgtcacatcgacctgcggtactgcaaa
caggtgaccaaagagggttgtgagcagttcatcgcagagatgtccgtcagcgtgcagttc
agactgatcgaggaaaaactactgcgcaaactgagctag

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