KEGG   Cyprinus carpio (common carp): 109092759
Entry
109092759         CDS       T05134                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX41
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    109092759
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccar03041]
    109092759
Enzymes [BR:ccar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     109092759
Spliceosome [BR:ccar03041]
 Complex C
  Other components
   Complex C specific factors
    109092759
SSDB
Motif
Pfam: DEAD zf-CCHC
Other DBs
NCBI-GeneID: 109092759
NCBI-ProteinID: XP_018962035
Position
13:15811539..15817438
AA seq 458 aa
MPSPPWYPSTSQTGTAPPSQQTLSVLTIAATPPGSLTSVPPAGRSRRRKALVPQRNYSEK
SGSEGSEDDDYVPYVPVKIRNSRCSVVHHHYRNYSEKSGSEGSEDDDYVPYVPVKIRKQQ
MLQKXCVYRGKGLTEEEQKDSGGEQKDEDEVFSNCTLIIVARKESAKEKQLKEEEKILES
VAEGRALMSVKEMAKGITYEDPIKTSWKAPRYIHGMPAARHERVRKKYHILVEGEGIPPP
IKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPI
IMFCLEQEKRLPFCKREGPYGLIICPSVSLLCFCHILCCLPEIQQKNEKQITYEVEYVKE
EAKMVYLLECLQKSPPPVLIFAEKKADVDAIHEYLLLKGVEALSIDLLLFSILEERGCTF
CGGLGHRITVCPKLEAMQTKQVTNIGRKDYLASSSMDF
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgccctcgccgccgtggtatccctctacatcccagacggggacggcgcccccttcacag
cagaccctgtcggtactgacgatagcggccacaccacctggctccttgacatcggtgccg
ccagcgggacgttcacggcgacgcaaggcgctggtaccccagagaaactactcagagaag
tctggatcagagggctcagaagatgatgactatgtgccgtatgttcctgttaagatcaga
aacagcagatgctctgtggttcaccaccactatagaaactactcagagaagtctggatca
gagggctcagaagatgatgactatgtgccgtatgttcctgttaagatcagaaaacagcag
atgctccagaagtgatgcgtttaccgggggaaagggcttacagaggaggaacagaaagat
agtggtggagagcagaaagatgaggatgaggtattttcaaattgcacattaataattgta
gctcgaaaggagtctgccaaggagaaacaactgaaagaggaagaaaagattctggagagc
gttgctgaaggcagagctctaatgtctgtgaaggagatggccaaaggaatcacatatgaa
gacccaataaaaacaagctggaaagctccacgttacattcatggcatgccagcagcgcgg
catgaacgtgtacggaagaagtaccacattcttgttgaaggtgaaggcattccaccaccc
attaagagcttcagagagatgaagttccctcaggccatccttaaaggactgaagaaaaaa
ggaatcgttcacccgacaccaattcagattcagggaataccaaccattctctctggcagg
gacatgattggcattgctttcaccggctcagggaaaactctggttttcacgctgcccatc
ataatgttttgtctggagcaggagaaacggttacccttctgtaagagagagggaccctat
ggcctcatcatctgcccttctgtaagcctactctgtttctgtcacatcctgtgttgtctg
ccagaaatacagcagaaaaatgagaagcagataacctatgaagtggaatatgtcaaagaa
gaggccaaaatggtttatctcctggagtgtctccagaagagcccaccgccagtattaata
ttcgctgagaagaaagcagatgtagatgccatacacgagtatcttctgctgaaaggtgtg
gaggcgctgtcaattgatttattgcttttttccatcctagaagagagaggctgtacattt
tgtggtggtttgggccacaggatcacagtctgccccaaactggaggccatgcagacaaaa
caggtcaccaacatcggccgcaaggactatctggccagcagctccatggatttttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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