KEGG   Cyprinus carpio (common carp): 109096783
Entry
109096783         CDS       T05134                                 
Name
(RefSeq) histone deacetylase complex subunit SAP18-like
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03013  Nucleocytoplasmic transport
ccar03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109096783
   03015 mRNA surveillance pathway
    109096783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109096783
   03036 Chromosome and associated proteins [BR:ccar03036]
    109096783
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109096783
Chromosome and associated proteins [BR:ccar03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     109096783
SSDB
Motif
Pfam: SAP18 Alpha_L_fucos
Other DBs
NCBI-GeneID: 109096783
NCBI-ProteinID: XP_018965981
UniProt: A0A8C1CIT3
Position
18:complement(12781681..12782935)
AA seq 153 aa
MAVESRVTQEEIKKEPEKPVDREKTCPLLLRVFTTNNGRHHRMDEFARGNVPSSELQIYT
WMDANLKELTSLVKEVYPEARKKGTHFGFAIVYPDPKRQMYRVKEIGNTVSGRKGADDSM
TLQSQRFQIGDYLDIAITPPNRAPPLQGRMRPY
NT seq 462 nt   +upstreamnt  +downstreamnt
atggctgtagaatcaagggtcacgcaagaggaaatcaaaaaagagccagaaaagccagtg
gacagagagaagacatgtcctcttcttctccgagttttcaccactaataacggaaggcat
catcgcatggacgagtttgcccgggggaacgtaccatctagcgagcttcagatttatacc
tggatggatgctaatttgaaggaactgacgagcctggtgaaggaagtttatcccgaagct
cgaaagaaaggcacacattttgggtttgctatagtatacccagaccccaaacgacaaatg
tacagggttaaagagattggcaatacggtttcgggacgcaaaggtgcggatgactccatg
acgcttcagtctcagcgctttcagatcggagattaccttgacatcgccatcactccgcct
aaccgtgcaccacctctccaaggacgcatgagaccctactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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