KEGG   Cyprinus carpio (common carp): 109109049
Entry
109109049         CDS       T05134                                 
Symbol
utp4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109109049 (utp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccar03009]
    109109049 (utp4)
Ribosome biogenesis [BR:ccar03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    109109049 (utp4)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Lactonase PROPPIN Frtz
Other DBs
NCBI-GeneID: 109109049
NCBI-ProteinID: XP_018977708
Position
35:16379819..16385685
AA seq 685 aa
MGEFKVHRVRFFDYMPSGIRALAFNRDIERIAVARMDGSVEVFHCSDRFFQEKIIPGREQ
CGIEGLSWVGERLFSAGLNGGITEYDLTNQKVKYTIDAYGGPIWTIAGNQQGTHLAVGCE
DGTVKLFEVNEDKIQFERNLDRQKSRIISLSWHPSGSKIAAGMMDMIQIFNVETGHSVHR
LLADRGVGTSRSKECVVWSVVYLSDGTIISGDSVGMVKLWDDQTGTLIKSHNVTKCDVLA
LSVSQNEDSLVAGTSEGTVVQFQFISMVLGKDDKEWVRTRTFKNHTHDIRAVAEITTAVV
SGGMDAQLVVRPLLDKVEVRSAASALRKIHFPHRRLVSCARKSGLMLSSTLGHLELWRLG
ESEGKGMPGSSLFVKRNPEKLLHLKVKGEDHIRCSAVSPCGEWIVYSTASSLRLYRLHCD
NNNVSITKISKLPMVLSSANQLCFSSDSSHLFSASTQSSVHLVSLSQSGCKFVGTLKPKS
GSHQAIHLLAASEDGKWLASANSDHEVHIYNLQTRKAHCTVPVYSSAVTAMGIHPTTNCL
FMMYADQQMCEYSIEQKQYTDWSRTVQRKGLHRFWMERDTPCLNVMFNPQNPSHVILHDT
YMLCIIDQSLPLPDDKTQFYNQLTLKSLPEEQRKSHSHAFKVCKTFKDILCVELMSDQSL
VVVERPLEDVASQLPAPIKQKKFAT
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgggggagtttaaagttcaccgggttcggttctttgactacatgccgtcgggaatcaga
gccttggctttcaatcgagatattgaaaggattgcagtggcgaggatggacggatcagtg
gaggttttccactgttcagacagatttttccaagaaaagatcatccctggcagagagcag
tgtgggattgaaggcctgtcctgggttggggagcgtctgttcagtgcaggactaaacggt
ggaataacagagtatgacctgacaaaccagaaagtgaaatacaccatagatgcctatgga
gggccaatctggactattgcaggcaatcaacaaggaacacacttagcggttggttgtgaa
gacggaactgtgaaactgtttgaggtgaatgaagacaaaatacagtttgagagaaatctg
gataggcagaaaagccgcatcatctctctgtcctggcacccatcaggctccaaaatagca
gctggaatgatggatatgatccagatatttaatgtagagacaggccactctgtacacagg
ctgctggctgacagaggggtcgggacatcccgcagtaaggaatgcgtggtgtggagtgtg
gtgtacctctcggatgggacaatcatcagtggagactctgtgggaatggtcaaattgtgg
gatgatcaaactggtacactaatcaaaagccataatgtcacaaaatgtgatgtgctggca
ttatcagtctctcagaatgaggacagccttgttgccgggacttcagaaggaactgtggta
cagttccagttcatctctatggttttgggaaaggatgacaaagaatgggtcagaaccaga
acatttaagaaccacacgcatgacatcagagctgtggcggagatcacgacggcggtggtt
tcaggaggtatggatgcacagctggtcgtgagacctttattagacaaggtcgaagtgagg
tcagcggcctcagctttgaggaagattcactttccacataggagactggtgtcctgtgcg
aggaagtcaggcctgatgctttccagtacccttggtcatctggagctctggagactggga
gagagtgaaggaaaaggcatgccaggaagcagtttatttgtaaaaagaaatccagagaag
ctgcttcatttgaaagtgaagggtgaggatcacatccgctgcagtgccgtgtctccctgt
ggagaatggattgtgtactccacagccagcagtctacggctctacaggctacactgcgac
aataacaacgtcagcatcaccaagatatccaaacttccaatggtactcagctcagccaat
cagctttgcttctcctcagactcctcccatttgttttccgcctccacacagtcatcagtg
cacttagtttctctcagccaatcaggatgcaagtttgtgggcacccttaaacctaagtca
ggttcccatcaggccattcacttattagctgccagtgaggatggcaaatggttggcctct
gcaaacagtgaccacgaggttcacatctacaacctgcagacacggaaggctcattgcacg
gttcctgtatacagctctgctgtcaccgccatgggcatccacccaacaacaaactgtctg
ttcatgatgtatgcagatcaacagatgtgcgagtattctatagagcagaaacagtacaca
gattggagcagaacggtgcagaggaagggccttcatcgcttctggatggaaagagacaca
ccgtgtctcaatgtgatgttcaatccacaaaatccatcccatgttatcctgcatgatacc
tacatgctctgcatcattgaccaaagcctgccacttcctgatgacaaaactcaattttac
aatcagctgaccctgaagagcctcccagaagaacagaggaaatctcacagccatgctttt
aaagtctgcaagaccttcaaggatatcctgtgtgttgagttgatgtcggatcagtctctg
gtggtggttgagcgccctctagaggacgtcgcctctcagttgcctgcacccatcaaacaa
aagaaatttgccacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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